Protein–RNA interactions for Protein: Q16787

LAMA3, Laminin subunit alpha-3, humanhuman

Predictions only

Length 3,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3Q16787 RN7SKP167-201ENST00000411047 285 ntBASIC4.43□□□□□ -1.7
LAMA3Q16787 RPS7P15-201ENST00000415804 584 ntBASIC4.43□□□□□ -1.7
LAMA3Q16787 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.43□□□□□ -1.7
LAMA3Q16787 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.43□□□□□ -1.7
LAMA3Q16787 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LAMA3Q16787 YPEL5P3-201ENST00000547227 352 ntBASIC4.43□□□□□ -1.7
LAMA3Q16787 AC013412.1-201ENST00000610687 192 ntBASIC4.43□□□□□ -1.7
LAMA3Q16787 MIR6868-201ENST00000611215 58 ntBASIC4.43□□□□□ -1.7
LAMA3Q16787 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LAMA3Q16787 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
LAMA3Q16787 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LAMA3Q16787 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LAMA3Q16787 RPL7P58-201ENST00000402913 758 ntBASIC4.43□□□□□ -1.7
LAMA3Q16787 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.43□□□□□ -1.7
LAMA3Q16787 AL139247.1-201ENST00000422768 325 ntBASIC4.43□□□□□ -1.7
LAMA3Q16787 RPS4XP12-201ENST00000461747 709 ntBASIC4.43□□□□□ -1.7
LAMA3Q16787 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LAMA3Q16787 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.43□□□□□ -1.7
LAMA3Q16787 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.43□□□□□ -1.7
LAMA3Q16787 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.43□□□□□ -1.7
LAMA3Q16787 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.43□□□□□ -1.7
LAMA3Q16787 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LAMA3Q16787 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LAMA3Q16787 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.42□□□□□ -1.7
LAMA3Q16787 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.42□□□□□ -1.7
LAMA3Q16787 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
LAMA3Q16787 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
LAMA3Q16787 FCF1P5-201ENST00000406490 482 ntBASIC4.42□□□□□ -1.7
LAMA3Q16787 TRIM60P17-201ENST00000415181 719 ntBASIC4.42□□□□□ -1.7
LAMA3Q16787 USP9YP36-201ENST00000424581 829 ntBASIC4.42□□□□□ -1.7
LAMA3Q16787 USP9YP31-201ENST00000431405 881 ntBASIC4.42□□□□□ -1.7
LAMA3Q16787 RN7SL271P-201ENST00000487601 295 ntBASIC4.42□□□□□ -1.7
LAMA3Q16787 AC110743.1-201ENST00000584870 478 ntBASIC4.42□□□□□ -1.7
LAMA3Q16787 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.42□□□□□ -1.7
LAMA3Q16787 AC012213.2-201ENST00000562917 4597 ntBASIC4.42□□□□□ -1.7
LAMA3Q16787 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
LAMA3Q16787 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
LAMA3Q16787 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 RNU1-63P-201ENST00000383902 164 ntBASIC4.42□□□□□ -1.7
LAMA3Q16787 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.42□□□□□ -1.7
LAMA3Q16787 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.42□□□□□ -1.7
LAMA3Q16787 RN7SL601P-201ENST00000471221 293 ntBASIC4.42□□□□□ -1.7
LAMA3Q16787 AC006064.5-201ENST00000541782 248 ntBASIC4.42□□□□□ -1.7
LAMA3Q16787 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.42□□□□□ -1.7
LAMA3Q16787 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
LAMA3Q16787 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.42□□□□□ -1.7
LAMA3Q16787 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
LAMA3Q16787 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LAMA3Q16787 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LAMA3Q16787 SNORA70.6-201ENST00000383934 134 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 ATP5A1P2-201ENST00000412323 255 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 COX5BP7-201ENST00000414780 274 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.41□□□□□ -1.7
LAMA3Q16787 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LAMA3Q16787 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LAMA3Q16787 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LAMA3Q16787 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LAMA3Q16787 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LAMA3Q16787 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.41□□□□□ -1.7
LAMA3Q16787 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.41□□□□□ -1.7
LAMA3Q16787 BNIP3P10-201ENST00000605360 577 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LAMA3Q16787 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.41□□□□□ -1.7
LAMA3Q16787 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.41□□□□□ -1.7
LAMA3Q16787 AC074029.4-201ENST00000624796 1859 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC4.41□□□□□ -1.7
LAMA3Q16787 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LAMA3Q16787 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LAMA3Q16787 SNORA48.5-201ENST00000391143 135 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LAMA3Q16787 AC013429.2-201ENST00000418798 781 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 HSPD1P21-201ENST00000436541 245 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 RHEBP2-201ENST00000450289 600 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 SETP14-201ENST00000497538 873 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 HPRT1P2-201ENST00000505250 544 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.41□□□□□ -1.7
LAMA3Q16787 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.41□□□□□ -1.7
LAMA3Q16787 MIR3945-201ENST00000581853 98 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 AL645927.2-201ENST00000618350 349 ntBASIC4.41□□□□□ -1.7
LAMA3Q16787 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LAMA3Q16787 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LAMA3Q16787 AL442128.2-201ENST00000620246 1824 ntBASIC4.4□□□□□ -1.7
LAMA3Q16787 AC010329.1-201ENST00000593903 8328 ntBASIC4.4□□□□□ -1.7
LAMA3Q16787 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC4.4□□□□□ -1.7
LAMA3Q16787 ANKRD36P1-201ENST00000344424 659 ntBASIC4.4□□□□□ -1.7
LAMA3Q16787 CYCSP53-201ENST00000455540 265 ntBASIC4.4□□□□□ -1.7
LAMA3Q16787 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.4□□□□□ -1.7
LAMA3Q16787 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.4□□□□□ -1.7
LAMA3Q16787 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms