Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.73□□□□□ -1.49
RIPK4P57078 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIPK4P57078 KPNA2P3-201ENST00000584190 848 ntBASIC5.73□□□□□ -1.49
RIPK4P57078 AC239803.2-201ENST00000610161 430 ntBASIC5.73□□□□□ -1.49
RIPK4P57078 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.73□□□□□ -1.49
RIPK4P57078 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.73□□□□□ -1.49
RIPK4P57078 AC140113.4-201ENST00000622087 222 ntBASIC5.73□□□□□ -1.49
RIPK4P57078 AP003497.2-201ENST00000624220 967 ntBASIC5.73□□□□□ -1.49
RIPK4P57078 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.73□□□□□ -1.49
RIPK4P57078 FP325313.1-201ENST00000638228 703 ntBASIC5.73□□□□□ -1.49
RIPK4P57078 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.73□□□□□ -1.49
RIPK4P57078 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RIPK4P57078 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RIPK4P57078 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIPK4P57078 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.73□□□□□ -1.49
RIPK4P57078 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIPK4P57078 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIPK4P57078 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIPK4P57078 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIPK4P57078 RNU1-44P-201ENST00000384453 163 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.72□□□□□ -1.49
RIPK4P57078 VDAC1P9-201ENST00000412766 841 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.72□□□□□ -1.49
RIPK4P57078 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.72□□□□□ -1.49
RIPK4P57078 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.72□□□□□ -1.49
RIPK4P57078 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.72□□□□□ -1.49
RIPK4P57078 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.72□□□□□ -1.49
RIPK4P57078 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.72□□□□□ -1.49
RIPK4P57078 RN7SL812P-201ENST00000493791 279 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.72□□□□□ -1.49
RIPK4P57078 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.72□□□□□ -1.49
RIPK4P57078 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.72□□□□□ -1.49
RIPK4P57078 AC106806.2-201ENST00000509365 500 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 AC022882.1-201ENST00000532142 501 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.72□□□□□ -1.49
RIPK4P57078 ATP5J2P6-201ENST00000565203 266 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 RPL23AP97-201ENST00000568955 471 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 AL353726.1-201ENST00000614041 1000 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 AL021997.2-201ENST00000615674 271 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RIPK4P57078 AC140479.6-201ENST00000633535 357 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.72□□□□□ -1.49
RIPK4P57078 AL158163.1-201ENST00000603915 1649 ntBASIC5.72□□□□□ -1.49
RIPK4P57078 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.72□□□□□ -1.49
RIPK4P57078 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIPK4P57078 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIPK4P57078 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.72□□□□□ -1.49
RIPK4P57078 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RIPK4P57078 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RIPK4P57078 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.72□□□□□ -1.49
RIPK4P57078 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RIPK4P57078 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.71□□□□□ -1.49
RIPK4P57078 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
RIPK4P57078 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
RIPK4P57078 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RIPK4P57078 BMS1P3-201ENST00000372011 932 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 AL078604.1-201ENST00000404609 466 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.71□□□□□ -1.5
RIPK4P57078 AC073587.1-201ENST00000447093 876 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 RPS27AP15-201ENST00000447672 466 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 SEPT7P3-201ENST00000455017 621 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 RPL7AP52-201ENST00000458096 790 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 AC114982.2-201ENST00000461396 358 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 RPL7P22-201ENST00000466005 733 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RIPK4P57078 AC041039.1-201ENST00000485656 536 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.71□□□□□ -1.5
RIPK4P57078 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.71□□□□□ -1.5
RIPK4P57078 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIPK4P57078 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.71□□□□□ -1.5
RIPK4P57078 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.71□□□□□ -1.5
RIPK4P57078 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.71□□□□□ -1.5
RIPK4P57078 AL139041.1-201ENST00000605480 610 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.71□□□□□ -1.5
RIPK4P57078 MIR6830-201ENST00000636015 70 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.71□□□□□ -1.5
RIPK4P57078 AL139254.3-201ENST00000641097 674 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 OR52H1-202ENST00000641796 1061 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 TTC39DP-201ENST00000416781 1688 ntBASIC5.71□□□□□ -1.5
RIPK4P57078 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RIPK4P57078 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIPK4P57078 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIPK4P57078 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIPK4P57078 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RIPK4P57078 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RIPK4P57078 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.7□□□□□ -1.5
RIPK4P57078 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIPK4P57078 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIPK4P57078 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIPK4P57078 RNU6-249P-201ENST00000363016 102 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 RNA5SP28-201ENST00000363841 119 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 NACAP7-201ENST00000407371 609 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 RNU6-233P-201ENST00000410845 141 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 AC234779.1-201ENST00000425910 285 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 NIPA2P1-201ENST00000426223 976 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.7□□□□□ -1.5
RIPK4P57078 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.7□□□□□ -1.5
RIPK4P57078 AC109327.1-201ENST00000471666 403 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 RPL23AP65-201ENST00000475608 468 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms