Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN6P56747 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
CLDN6P56747 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN6P56747 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.44□□□□□ -1.7
CLDN6P56747 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CLDN6P56747 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CLDN6P56747 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN6P56747 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN6P56747 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN6P56747 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN6P56747 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CLDN6P56747 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.43□□□□□ -1.7
CLDN6P56747 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN6P56747 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN6P56747 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN6P56747 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN6P56747 LINC01355-201ENST00000566551 5444 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN6P56747 RN7SKP74-201ENST00000362849 309 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 RN7SKP280-201ENST00000364196 304 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 RNU1-13P-201ENST00000384499 162 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 RNA5SP171-201ENST00000391071 115 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 RNA5SP317-201ENST00000410176 116 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 RNA5SP296-201ENST00000410523 111 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 RNA5SP311-201ENST00000411290 116 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 RPL23AP26-201ENST00000412728 464 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN6P56747 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN6P56747 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN6P56747 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN6P56747 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN6P56747 Z95327.1-201ENST00000446082 482 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN6P56747 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN6P56747 AC015795.1-201ENST00000513669 327 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.43□□□□□ -1.7
CLDN6P56747 RNA5SP315-201ENST00000516340 116 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 RNA5SP312-201ENST00000517068 116 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN6P56747 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.43□□□□□ -1.7
CLDN6P56747 PSMB7P1-201ENST00000556349 514 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 CCDC58P3-201ENST00000590792 430 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN6P56747 AC020634.1-201ENST00000608701 549 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 AC015914.2-201ENST00000618167 288 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN6P56747 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN6P56747 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN6P56747 VN2R3P-201ENST00000422626 1412 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN6P56747 SMG1P6-201ENST00000532337 2930 ntBASIC4.43□□□□□ -1.7
CLDN6P56747 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN6P56747 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN6P56747 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN6P56747 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN6P56747 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLDN6P56747 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN6P56747 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN6P56747 HSPA8P17-201ENST00000427029 1382 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN6P56747 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN6P56747 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN6P56747 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN6P56747 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN6P56747 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN6P56747 MIR372-201ENST00000362225 67 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 RNU1-94P-201ENST00000362627 173 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 RN7SKP224-201ENST00000364140 325 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLDN6P56747 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN6P56747 AL590762.2-201ENST00000395798 571 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 TMBIM7P-201ENST00000418074 855 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 GLUD1P9-201ENST00000420997 1173 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN6P56747 AL451139.1-201ENST00000434718 346 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN6P56747 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN6P56747 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 AC041039.1-201ENST00000485656 536 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN6P56747 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN6P56747 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN6P56747 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN6P56747 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN6P56747 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN6P56747 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN6P56747 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN6P56747 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN6P56747 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CLDN6P56747 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN6P56747 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN6P56747 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CLDN6P56747 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN6P56747 RN7SL435P-201ENST00000584418 282 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 AC006272.2-201ENST00000594725 163 ntBASIC4.42□□□□□ -1.7
CLDN6P56747 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN6P56747 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN6P56747 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN6P56747 AP003497.2-201ENST00000624220 967 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms