Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.3□□□□□ -1.72
LIM2P55344 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.3□□□□□ -1.72
LIM2P55344 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.3□□□□□ -1.72
LIM2P55344 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIM2P55344 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.3□□□□□ -1.72
LIM2P55344 MAPK10-286ENST00000641208 8747 ntBASIC4.3□□□□□ -1.72
LIM2P55344 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIM2P55344 RNA5SP505-201ENST00000364748 108 ntBASIC4.3□□□□□ -1.72
LIM2P55344 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LIM2P55344 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LIM2P55344 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.3□□□□□ -1.72
LIM2P55344 MIR659-201ENST00000384963 97 ntBASIC4.3□□□□□ -1.72
LIM2P55344 AC119751.6-201ENST00000416712 186 ntBASIC4.3□□□□□ -1.72
LIM2P55344 MTCYBP7-201ENST00000419540 1134 ntBASIC4.3□□□□□ -1.72
LIM2P55344 RNF19BPX-201ENST00000426224 625 ntBASIC4.3□□□□□ -1.72
LIM2P55344 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.3□□□□□ -1.72
LIM2P55344 RPL21P91-201ENST00000429231 479 ntBASIC4.3□□□□□ -1.72
LIM2P55344 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.3□□□□□ -1.72
LIM2P55344 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.3□□□□□ -1.72
LIM2P55344 MTCYBP29-201ENST00000436327 1006 ntBASIC4.3□□□□□ -1.72
LIM2P55344 RPL23AP93-201ENST00000440847 484 ntBASIC4.3□□□□□ -1.72
LIM2P55344 AC011753.3-201ENST00000443436 406 ntBASIC4.3□□□□□ -1.72
LIM2P55344 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.3□□□□□ -1.72
LIM2P55344 AL162591.2-201ENST00000449634 317 ntBASIC4.3□□□□□ -1.72
LIM2P55344 CALM1P2-201ENST00000452941 448 ntBASIC4.3□□□□□ -1.72
LIM2P55344 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.3□□□□□ -1.72
LIM2P55344 AC069277.2-201ENST00000454211 432 ntBASIC4.3□□□□□ -1.72
LIM2P55344 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.3□□□□□ -1.72
LIM2P55344 NPM1P29-201ENST00000483112 803 ntBASIC4.3□□□□□ -1.72
LIM2P55344 AC008897.1-201ENST00000494006 347 ntBASIC4.3□□□□□ -1.72
LIM2P55344 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.3□□□□□ -1.72
LIM2P55344 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.3□□□□□ -1.72
LIM2P55344 ACTR6P1-201ENST00000514311 1104 ntBASIC4.3□□□□□ -1.72
LIM2P55344 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.3□□□□□ -1.72
LIM2P55344 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.3□□□□□ -1.72
LIM2P55344 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.3□□□□□ -1.72
LIM2P55344 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
LIM2P55344 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
LIM2P55344 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.3□□□□□ -1.72
LIM2P55344 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.3□□□□□ -1.72
LIM2P55344 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.3□□□□□ -1.72
LIM2P55344 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.3□□□□□ -1.72
LIM2P55344 AC091178.1-203ENST00000584586 279 ntBASIC4.3□□□□□ -1.72
LIM2P55344 HMGB2P1-201ENST00000591146 634 ntBASIC4.3□□□□□ -1.72
LIM2P55344 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.3□□□□□ -1.72
LIM2P55344 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIM2P55344 AC023762.1-201ENST00000603280 584 ntBASIC4.3□□□□□ -1.72
LIM2P55344 AC008966.2-201ENST00000606157 453 ntBASIC4.3□□□□□ -1.72
LIM2P55344 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.3□□□□□ -1.72
LIM2P55344 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.3□□□□□ -1.72
LIM2P55344 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LIM2P55344 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.3□□□□□ -1.72
LIM2P55344 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIM2P55344 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIM2P55344 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.3□□□□□ -1.72
LIM2P55344 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LIM2P55344 AC053481.2-202ENST00000582394 1500 ntBASIC4.3□□□□□ -1.72
LIM2P55344 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LIM2P55344 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIM2P55344 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
LIM2P55344 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LIM2P55344 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 MAPK10-303ENST00000641324 3959 ntBASIC4.29□□□□□ -1.72
LIM2P55344 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.29□□□□□ -1.72
LIM2P55344 UGT2B26P-201ENST00000508672 1613 ntBASIC4.29□□□□□ -1.72
LIM2P55344 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 AC093775.1-201ENST00000624154 1868 ntBASIC4.29□□□□□ -1.72
LIM2P55344 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 RNA5SP151-201ENST00000365632 117 ntBASIC4.29□□□□□ -1.72
LIM2P55344 RNU6-398P-201ENST00000384143 109 ntBASIC4.29□□□□□ -1.72
LIM2P55344 RNA5SP372-201ENST00000390836 115 ntBASIC4.29□□□□□ -1.72
LIM2P55344 RPL5P19-201ENST00000404228 893 ntBASIC4.29□□□□□ -1.72
LIM2P55344 RN7SKP167-201ENST00000411047 285 ntBASIC4.29□□□□□ -1.72
LIM2P55344 VDAC1P9-201ENST00000412766 841 ntBASIC4.29□□□□□ -1.72
LIM2P55344 CEACAMP8-201ENST00000413902 580 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AC009237.10-201ENST00000414112 510 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AC016769.2-201ENST00000414815 475 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 AC092570.3-201ENST00000420113 693 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AC069213.2-201ENST00000420238 366 ntBASIC4.29□□□□□ -1.72
LIM2P55344 UQCRBP1-201ENST00000421129 336 ntBASIC4.29□□□□□ -1.72
LIM2P55344 RAD23BP1-201ENST00000421404 1227 ntBASIC4.29□□□□□ -1.72
LIM2P55344 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 AL138878.2-201ENST00000440581 1241 ntBASIC4.29□□□□□ -1.72
LIM2P55344 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 RPS29P22-201ENST00000472363 168 ntBASIC4.29□□□□□ -1.72
LIM2P55344 OR52A4P-201ENST00000472867 958 ntBASIC4.29□□□□□ -1.72
LIM2P55344 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.29□□□□□ -1.72
LIM2P55344 HAUS1P1-201ENST00000505275 832 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms