Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.11□□□□□ -1.59
VCPP55072 GTF2IP5-201ENST00000414608 731 ntBASIC5.11□□□□□ -1.59
VCPP55072 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 AC023141.6-201ENST00000429418 337 ntBASIC5.11□□□□□ -1.59
VCPP55072 NRBF2P3-201ENST00000432731 865 ntBASIC5.11□□□□□ -1.59
VCPP55072 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.11□□□□□ -1.59
VCPP55072 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.11□□□□□ -1.59
VCPP55072 MTND6P18-201ENST00000439477 513 ntBASIC5.11□□□□□ -1.59
VCPP55072 AL031584.1-201ENST00000447169 754 ntBASIC5.11□□□□□ -1.59
VCPP55072 PTMAP3-201ENST00000447474 330 ntBASIC5.11□□□□□ -1.59
VCPP55072 RHEBP2-201ENST00000450289 600 ntBASIC5.11□□□□□ -1.59
VCPP55072 MTCYBP14-201ENST00000457471 715 ntBASIC5.11□□□□□ -1.59
VCPP55072 AL591473.1-201ENST00000464297 313 ntBASIC5.11□□□□□ -1.59
VCPP55072 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.11□□□□□ -1.59
VCPP55072 RPL21P6-201ENST00000479171 504 ntBASIC5.11□□□□□ -1.59
VCPP55072 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.11□□□□□ -1.59
VCPP55072 MTCO1P35-201ENST00000515270 228 ntBASIC5.11□□□□□ -1.59
VCPP55072 AC138938.1-201ENST00000515431 782 ntBASIC5.11□□□□□ -1.59
VCPP55072 RNA5SP392-201ENST00000516905 112 ntBASIC5.11□□□□□ -1.59
VCPP55072 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.11□□□□□ -1.59
VCPP55072 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.11□□□□□ -1.59
VCPP55072 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.11□□□□□ -1.59
VCPP55072 AC245389.1-201ENST00000605141 529 ntBASIC5.11□□□□□ -1.59
VCPP55072 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.11□□□□□ -1.59
VCPP55072 AC107905.1-201ENST00000616204 426 ntBASIC5.11□□□□□ -1.59
VCPP55072 AL049794.2-201ENST00000616301 365 ntBASIC5.11□□□□□ -1.59
VCPP55072 MIR8069-1-201ENST00000616627 86 ntBASIC5.11□□□□□ -1.59
VCPP55072 MIR8069-2-201ENST00000621412 86 ntBASIC5.11□□□□□ -1.59
VCPP55072 AC019206.1-201ENST00000621938 425 ntBASIC5.11□□□□□ -1.59
VCPP55072 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.11□□□□□ -1.59
VCPP55072 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.11□□□□□ -1.59
VCPP55072 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VCPP55072 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.11□□□□□ -1.59
VCPP55072 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VCPP55072 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VCPP55072 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 AC008549.2-201ENST00000333482 706 ntBASIC5.1□□□□□ -1.59
VCPP55072 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VCPP55072 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 AC240504.1-201ENST00000395709 845 ntBASIC5.1□□□□□ -1.59
VCPP55072 AL450326.2-201ENST00000421913 1962 ntBASIC5.1□□□□□ -1.59
VCPP55072 RFESDP1-201ENST00000422350 461 ntBASIC5.1□□□□□ -1.59
VCPP55072 RPEP3-201ENST00000425462 676 ntBASIC5.1□□□□□ -1.59
VCPP55072 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 OR2B7P-201ENST00000429302 934 ntBASIC5.1□□□□□ -1.59
VCPP55072 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.1□□□□□ -1.59
VCPP55072 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.1□□□□□ -1.59
VCPP55072 RPL12P28-201ENST00000430852 489 ntBASIC5.1□□□□□ -1.59
VCPP55072 RPS26P4-201ENST00000431743 355 ntBASIC5.1□□□□□ -1.59
VCPP55072 AC092162.1-201ENST00000432828 434 ntBASIC5.1□□□□□ -1.59
VCPP55072 UBE2V2P3-201ENST00000433562 437 ntBASIC5.1□□□□□ -1.59
VCPP55072 CBX1P1-201ENST00000440184 427 ntBASIC5.1□□□□□ -1.59
VCPP55072 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.1□□□□□ -1.59
VCPP55072 EEF1A1P1-201ENST00000447052 739 ntBASIC5.1□□□□□ -1.59
VCPP55072 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VCPP55072 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.1□□□□□ -1.59
VCPP55072 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.1□□□□□ -1.59
VCPP55072 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.1□□□□□ -1.59
VCPP55072 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.1□□□□□ -1.59
VCPP55072 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.1□□□□□ -1.59
VCPP55072 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.1□□□□□ -1.59
VCPP55072 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.1□□□□□ -1.59
VCPP55072 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.1□□□□□ -1.59
VCPP55072 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.1□□□□□ -1.59
VCPP55072 SULT1C2P2-201ENST00000562517 294 ntBASIC5.1□□□□□ -1.59
VCPP55072 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.1□□□□□ -1.59
VCPP55072 AC007342.9-201ENST00000623877 1385 ntBASIC5.1□□□□□ -1.59
VCPP55072 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.1□□□□□ -1.59
VCPP55072 OR8B1P-202ENST00000641132 1178 ntBASIC5.1□□□□□ -1.59
VCPP55072 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
VCPP55072 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.1□□□□□ -1.59
VCPP55072 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.1□□□□□ -1.59
VCPP55072 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VCPP55072 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VCPP55072 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VCPP55072 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VCPP55072 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.09□□□□□ -1.59
VCPP55072 CASC19-206ENST00000641028 1430 ntBASIC5.09□□□□□ -1.59
VCPP55072 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VCPP55072 DDX18P5-201ENST00000534547 1306 ntBASIC5.09□□□□□ -1.59
VCPP55072 Y_RNA.62-201ENST00000362840 99 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms