Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
NUBP1P53384 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.1□□□□□ -1.11
NUBP1P53384 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.1□□□□□ -1.11
NUBP1P53384 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 AC087501.5-201ENST00000607496 2374 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 AC005261.2-201ENST00000593427 4258 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC8.1□□□□□ -1.11
NUBP1P53384 RNU6-700P-201ENST00000391043 107 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC8.1□□□□□ -1.11
NUBP1P53384 AC096921.1-201ENST00000411661 375 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 RPSAP60-201ENST00000415403 880 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 AC023141.10-201ENST00000415634 200 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8.1□□□□□ -1.11
NUBP1P53384 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC8.1□□□□□ -1.11
NUBP1P53384 EZH2P1-201ENST00000431167 291 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 AL604028.2-201ENST00000437848 788 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 FABP5P2-201ENST00000439042 408 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC8.1□□□□□ -1.11
NUBP1P53384 AL845321.1-201ENST00000444603 348 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 LIN28AP2-201ENST00000445283 458 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 AC087190.1-201ENST00000484462 480 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 AC107032.1-201ENST00000485945 480 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 SCARNA24.2-201ENST00000516968 130 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC8.1□□□□□ -1.11
NUBP1P53384 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC8.1□□□□□ -1.11
NUBP1P53384 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.1□□□□□ -1.11
NUBP1P53384 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
NUBP1P53384 U2.14-201ENST00000615943 113 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 SNHG22-203ENST00000617833 660 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 ERG-204ENST00000398907 4809 ntTSL 5 BASIC8.1□□□□□ -1.11
NUBP1P53384 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC8.1□□□□□ -1.11
NUBP1P53384 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC8.1□□□□□ -1.11
NUBP1P53384 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.1□□□□□ -1.11
NUBP1P53384 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC8.1□□□□□ -1.11
NUBP1P53384 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC8.1□□□□□ -1.11
NUBP1P53384 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
NUBP1P53384 ZNF750-201ENST00000269394 3713 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC8.09□□□□□ -1.11
NUBP1P53384 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.09□□□□□ -1.11
NUBP1P53384 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC8.09□□□□□ -1.11
NUBP1P53384 AP000560.1-201ENST00000624150 1937 ntBASIC8.09□□□□□ -1.11
NUBP1P53384 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 SHQ1P1-201ENST00000437111 1544 ntBASIC8.09□□□□□ -1.11
NUBP1P53384 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
NUBP1P53384 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC8.09□□□□□ -1.11
NUBP1P53384 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 MICAL2-217ENST00000527546 3358 ntTSL 5 BASIC8.09□□□□□ -1.11
NUBP1P53384 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.09□□□□□ -1.11
NUBP1P53384 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.09□□□□□ -1.11
NUBP1P53384 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC8.09□□□□□ -1.11
NUBP1P53384 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
NUBP1P53384 Y_RNA.439-201ENST00000384119 94 ntBASIC8.09□□□□□ -1.11
NUBP1P53384 Y_RNA.592-201ENST00000410274 109 ntBASIC8.09□□□□□ -1.11
NUBP1P53384 AL030996.1-201ENST00000411430 235 ntBASIC8.09□□□□□ -1.11
NUBP1P53384 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC8.09□□□□□ -1.11
NUBP1P53384 PPIAP30-201ENST00000415473 519 ntBASIC8.09□□□□□ -1.11
NUBP1P53384 SNX18P3-201ENST00000424993 835 ntBASIC8.09□□□□□ -1.11
NUBP1P53384 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.09□□□□□ -1.11
NUBP1P53384 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC8.09□□□□□ -1.11
NUBP1P53384 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC8.09□□□□□ -1.11
NUBP1P53384 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC8.09□□□□□ -1.11
NUBP1P53384 OARD1-211ENST00000480585 829 ntTSL 3 BASIC8.09□□□□□ -1.11
NUBP1P53384 MRPL42P6-201ENST00000486397 371 ntBASIC8.09□□□□□ -1.11
NUBP1P53384 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC8.09□□□□□ -1.11
NUBP1P53384 AC093023.1-201ENST00000547375 507 ntBASIC8.09□□□□□ -1.11
NUBP1P53384 HMGN1P26-201ENST00000558737 303 ntBASIC8.09□□□□□ -1.11
NUBP1P53384 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC8.09□□□□□ -1.11
NUBP1P53384 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC8.09□□□□□ -1.11
NUBP1P53384 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC8.09□□□□□ -1.11
NUBP1P53384 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC8.09□□□□□ -1.11
NUBP1P53384 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC8.09□□□□□ -1.11
NUBP1P53384 DEPDC5-204ENST00000400246 5551 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 LINC02555-201ENST00000563933 1951 ntBASIC8.09□□□□□ -1.11
NUBP1P53384 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.09□□□□□ -1.11
NUBP1P53384 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.09□□□□□ -1.11
NUBP1P53384 USP30-203ENST00000392784 2483 ntTSL 2 BASIC8.09□□□□□ -1.11
NUBP1P53384 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
NUBP1P53384 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NUBP1P53384 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms