Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
MSH6P52701 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.15□□□□□ -1.43
MSH6P52701 COX6B1P7-201ENST00000430845 235 ntBASIC6.15□□□□□ -1.43
MSH6P52701 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.15□□□□□ -1.43
MSH6P52701 DHX9P1-201ENST00000436565 3076 ntBASIC6.15□□□□□ -1.43
MSH6P52701 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.15□□□□□ -1.43
MSH6P52701 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.15□□□□□ -1.43
MSH6P52701 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
MSH6P52701 TRMT10BP1-201ENST00000519377 943 ntBASIC6.15□□□□□ -1.43
MSH6P52701 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.15□□□□□ -1.43
MSH6P52701 IFITM8P-201ENST00000522529 394 ntBASIC6.15□□□□□ -1.43
MSH6P52701 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MSH6P52701 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.15□□□□□ -1.43
MSH6P52701 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
MSH6P52701 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.15□□□□□ -1.43
MSH6P52701 DYNLL1P4-201ENST00000549314 266 ntBASIC6.15□□□□□ -1.43
MSH6P52701 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.15□□□□□ -1.43
MSH6P52701 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.15□□□□□ -1.43
MSH6P52701 AC243756.2-201ENST00000618406 463 ntBASIC6.15□□□□□ -1.43
MSH6P52701 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.15□□□□□ -1.43
MSH6P52701 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
MSH6P52701 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
MSH6P52701 AC015813.6-201ENST00000624409 5808 ntBASIC6.14□□□□□ -1.43
MSH6P52701 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
MSH6P52701 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MSH6P52701 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.14□□□□□ -1.43
MSH6P52701 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MSH6P52701 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MSH6P52701 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
MSH6P52701 RNA5SP119-201ENST00000362715 117 ntBASIC6.14□□□□□ -1.43
MSH6P52701 RNA5SP124-201ENST00000362739 110 ntBASIC6.14□□□□□ -1.43
MSH6P52701 AL358178.1-201ENST00000407698 397 ntBASIC6.14□□□□□ -1.43
MSH6P52701 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.14□□□□□ -1.43
MSH6P52701 TCEA1P4-201ENST00000415066 844 ntBASIC6.14□□□□□ -1.43
MSH6P52701 MFSD13B-201ENST00000420133 1290 ntBASIC6.14□□□□□ -1.43
MSH6P52701 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.14□□□□□ -1.43
MSH6P52701 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.14□□□□□ -1.43
MSH6P52701 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.14□□□□□ -1.43
MSH6P52701 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.14□□□□□ -1.43
MSH6P52701 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.14□□□□□ -1.43
MSH6P52701 AF131215.7-201ENST00000602443 707 ntBASIC6.14□□□□□ -1.43
MSH6P52701 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
MSH6P52701 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
MSH6P52701 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MSH6P52701 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.14□□□□□ -1.43
MSH6P52701 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.13□□□□□ -1.43
MSH6P52701 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.13□□□□□ -1.43
MSH6P52701 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSH6P52701 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSH6P52701 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
MSH6P52701 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
MSH6P52701 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSH6P52701 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
MSH6P52701 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSH6P52701 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
MSH6P52701 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MSH6P52701 AC108032.1-201ENST00000416706 207 ntBASIC6.13□□□□□ -1.43
MSH6P52701 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.13□□□□□ -1.43
MSH6P52701 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.13□□□□□ -1.43
MSH6P52701 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.13□□□□□ -1.43
MSH6P52701 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.13□□□□□ -1.43
MSH6P52701 RPS27AP17-201ENST00000463344 455 ntBASIC6.13□□□□□ -1.43
MSH6P52701 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.13□□□□□ -1.43
MSH6P52701 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.13□□□□□ -1.43
MSH6P52701 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.13□□□□□ -1.43
MSH6P52701 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.13□□□□□ -1.43
MSH6P52701 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.13□□□□□ -1.43
MSH6P52701 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.13□□□□□ -1.43
MSH6P52701 MIR5685-201ENST00000579080 79 ntBASIC6.13□□□□□ -1.43
MSH6P52701 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSH6P52701 AC012314.7-201ENST00000619693 93 ntBASIC6.13□□□□□ -1.43
MSH6P52701 TEX41-300ENST00000631048 69 ntTSL 5 BASIC6.13□□□□□ -1.43
MSH6P52701 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
MSH6P52701 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
MSH6P52701 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
MSH6P52701 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSH6P52701 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.13□□□□□ -1.43
MSH6P52701 CDY3P-201ENST00000454543 1618 ntBASIC6.13□□□□□ -1.43
MSH6P52701 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.13□□□□□ -1.43
MSH6P52701 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.12□□□□□ -1.43
MSH6P52701 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH6P52701 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.12□□□□□ -1.43
MSH6P52701 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC6.12□□□□□ -1.43
MSH6P52701 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
MSH6P52701 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
MSH6P52701 AC008549.2-201ENST00000333482 706 ntBASIC6.12□□□□□ -1.43
MSH6P52701 ENSAP1-201ENST00000392855 326 ntBASIC6.12□□□□□ -1.43
MSH6P52701 AL583835.1-201ENST00000399570 407 ntBASIC6.12□□□□□ -1.43
MSH6P52701 AC233289.1-201ENST00000403700 508 ntBASIC6.12□□□□□ -1.43
MSH6P52701 AL356276.2-201ENST00000435919 558 ntBASIC6.12□□□□□ -1.43
MSH6P52701 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MSH6P52701 AL157385.1-201ENST00000446973 268 ntBASIC6.12□□□□□ -1.43
MSH6P52701 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.12□□□□□ -1.43
MSH6P52701 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC6.12□□□□□ -1.43
MSH6P52701 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.12□□□□□ -1.43
MSH6P52701 AP000619.3-201ENST00000535634 1127 ntBASIC6.12□□□□□ -1.43
MSH6P52701 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.12□□□□□ -1.43
MSH6P52701 HSPE1P5-201ENST00000561489 272 ntBASIC6.12□□□□□ -1.43
MSH6P52701 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.12□□□□□ -1.43
MSH6P52701 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms