Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.32□□□□□ -1.72
SHC1P29353 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SHC1P29353 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SHC1P29353 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.32□□□□□ -1.72
SHC1P29353 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 RNU6-1263P-201ENST00000384601 106 ntBASIC4.32□□□□□ -1.72
SHC1P29353 RNU1-82P-201ENST00000390851 165 ntBASIC4.32□□□□□ -1.72
SHC1P29353 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 AL356057.1-202ENST00000402263 756 ntBASIC4.32□□□□□ -1.72
SHC1P29353 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.32□□□□□ -1.72
SHC1P29353 AC114755.2-201ENST00000413520 361 ntBASIC4.32□□□□□ -1.72
SHC1P29353 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.32□□□□□ -1.72
SHC1P29353 LINC00993-201ENST00000420453 540 ntBASIC4.32□□□□□ -1.72
SHC1P29353 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.32□□□□□ -1.72
SHC1P29353 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.32□□□□□ -1.72
SHC1P29353 AC004938.1-201ENST00000438468 308 ntBASIC4.32□□□□□ -1.72
SHC1P29353 RPL36AP15-201ENST00000444514 266 ntBASIC4.32□□□□□ -1.72
SHC1P29353 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.32□□□□□ -1.72
SHC1P29353 ATP5G1P3-201ENST00000463301 410 ntBASIC4.32□□□□□ -1.72
SHC1P29353 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 RPL23AP37-201ENST00000479658 549 ntBASIC4.32□□□□□ -1.72
SHC1P29353 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 OR9N1P-201ENST00000491296 333 ntBASIC4.32□□□□□ -1.72
SHC1P29353 DEFB109F-201ENST00000491870 277 ntBASIC4.32□□□□□ -1.72
SHC1P29353 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.32□□□□□ -1.72
SHC1P29353 AC231760.1-201ENST00000498002 260 ntBASIC4.32□□□□□ -1.72
SHC1P29353 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SHC1P29353 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.32□□□□□ -1.72
SHC1P29353 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.32□□□□□ -1.72
SHC1P29353 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.32□□□□□ -1.72
SHC1P29353 Y_RNA.719-201ENST00000517156 106 ntBASIC4.32□□□□□ -1.72
SHC1P29353 AC138701.1-201ENST00000524329 714 ntBASIC4.32□□□□□ -1.72
SHC1P29353 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.32□□□□□ -1.72
SHC1P29353 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.32□□□□□ -1.72
SHC1P29353 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.32□□□□□ -1.72
SHC1P29353 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.32□□□□□ -1.72
SHC1P29353 MIR5699-201ENST00000578903 90 ntBASIC4.32□□□□□ -1.72
SHC1P29353 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.32□□□□□ -1.72
SHC1P29353 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.32□□□□□ -1.72
SHC1P29353 AC018645.2-201ENST00000609151 472 ntBASIC4.32□□□□□ -1.72
SHC1P29353 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.32□□□□□ -1.72
SHC1P29353 AC100827.5-201ENST00000615883 426 ntBASIC4.32□□□□□ -1.72
SHC1P29353 AL445493.3-201ENST00000619568 477 ntBASIC4.32□□□□□ -1.72
SHC1P29353 AC012414.7-202ENST00000622705 1090 ntBASIC4.32□□□□□ -1.72
SHC1P29353 AL596275.2-204ENST00000641628 552 ntBASIC4.32□□□□□ -1.72
SHC1P29353 AL596275.2-206ENST00000641957 626 ntBASIC4.32□□□□□ -1.72
SHC1P29353 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.32□□□□□ -1.72
SHC1P29353 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SHC1P29353 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHC1P29353 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHC1P29353 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHC1P29353 AL606537.1-201ENST00000607258 2011 ntBASIC4.31□□□□□ -1.72
SHC1P29353 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHC1P29353 DDX18P4-201ENST00000511690 1966 ntBASIC4.31□□□□□ -1.72
SHC1P29353 LINC01109-201ENST00000603837 3081 ntBASIC4.31□□□□□ -1.72
SHC1P29353 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.31□□□□□ -1.72
SHC1P29353 SMG1P6-201ENST00000532337 2930 ntBASIC4.31□□□□□ -1.72
SHC1P29353 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHC1P29353 AC103591.2-201ENST00000265259 766 ntBASIC4.31□□□□□ -1.72
SHC1P29353 SNORA63.3-201ENST00000362682 132 ntBASIC4.31□□□□□ -1.72
SHC1P29353 RNA5SP87-201ENST00000384155 118 ntBASIC4.31□□□□□ -1.72
SHC1P29353 MIR195-201ENST00000385194 87 ntBASIC4.31□□□□□ -1.72
SHC1P29353 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.31□□□□□ -1.72
SHC1P29353 RN7SKP100-201ENST00000411258 284 ntBASIC4.31□□□□□ -1.72
SHC1P29353 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.31□□□□□ -1.72
SHC1P29353 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.31□□□□□ -1.72
SHC1P29353 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.31□□□□□ -1.72
SHC1P29353 AL049745.1-201ENST00000433953 286 ntBASIC4.31□□□□□ -1.72
SHC1P29353 HMGB3P10-201ENST00000434734 572 ntBASIC4.31□□□□□ -1.72
SHC1P29353 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.31□□□□□ -1.72
SHC1P29353 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.31□□□□□ -1.72
SHC1P29353 OR1H1P-201ENST00000448731 937 ntBASIC4.31□□□□□ -1.72
SHC1P29353 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.31□□□□□ -1.72
SHC1P29353 SBDSP1-204ENST00000453858 737 ntBASIC4.31□□□□□ -1.72
SHC1P29353 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHC1P29353 AC104971.1-201ENST00000495117 578 ntBASIC4.31□□□□□ -1.72
SHC1P29353 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.31□□□□□ -1.72
SHC1P29353 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHC1P29353 SCARNA22-201ENST00000503991 125 ntBASIC4.31□□□□□ -1.72
SHC1P29353 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHC1P29353 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
SHC1P29353 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.31□□□□□ -1.72
SHC1P29353 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.31□□□□□ -1.72
SHC1P29353 BUD31P1-201ENST00000521828 359 ntBASIC4.31□□□□□ -1.72
SHC1P29353 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.31□□□□□ -1.72
SHC1P29353 PCNPP1-201ENST00000552501 511 ntBASIC4.31□□□□□ -1.72
SHC1P29353 FKBP1BP1-201ENST00000553366 325 ntBASIC4.31□□□□□ -1.72
SHC1P29353 AC079075.1-201ENST00000559543 878 ntBASIC4.31□□□□□ -1.72
SHC1P29353 UBE2FP2-201ENST00000566646 462 ntBASIC4.31□□□□□ -1.72
SHC1P29353 SNORD39.2-201ENST00000579995 76 ntBASIC4.31□□□□□ -1.72
SHC1P29353 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms