Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC011712.1-201ENST00000588959 234 ntBASIC6.44□□□□□ -1.38
PDGFAP04085 RPL7AP69-201ENST00000595306 806 ntBASIC6.44□□□□□ -1.38
PDGFAP04085 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.44□□□□□ -1.38
PDGFAP04085 AC068790.5-201ENST00000602741 355 ntBASIC6.44□□□□□ -1.38
PDGFAP04085 AC009027.1-201ENST00000604510 479 ntBASIC6.44□□□□□ -1.38
PDGFAP04085 AL133173.2-201ENST00000614270 90 ntBASIC6.44□□□□□ -1.38
PDGFAP04085 AC090574.1-201ENST00000623186 233 ntBASIC6.44□□□□□ -1.38
PDGFAP04085 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFAP04085 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFAP04085 AC134882.1-201ENST00000603738 1676 ntBASIC6.44□□□□□ -1.38
PDGFAP04085 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFAP04085 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFAP04085 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.44□□□□□ -1.38
PDGFAP04085 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFAP04085 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.44□□□□□ -1.38
PDGFAP04085 AC073365.1-203ENST00000641055 1992 ntBASIC6.44□□□□□ -1.38
PDGFAP04085 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.44□□□□□ -1.38
PDGFAP04085 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.44□□□□□ -1.38
PDGFAP04085 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFAP04085 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.44□□□□□ -1.38
PDGFAP04085 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 AL596244.1-201ENST00000567068 3779 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 AC092162.3-201ENST00000624511 1624 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.43□□□□□ -1.38
PDGFAP04085 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 HSPA8P11-201ENST00000508840 1898 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFAP04085 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.43□□□□□ -1.38
PDGFAP04085 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PDGFAP04085 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
PDGFAP04085 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 RNY3P3-201ENST00000363816 102 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 RNU6-952P-201ENST00000391164 108 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 CNN3P1-201ENST00000401596 935 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 MIR1204-201ENST00000408388 67 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 GEMIN2P2-201ENST00000418195 715 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 RPS3AP38-201ENST00000435889 763 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 SEPT14P3-201ENST00000439401 183 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFAP04085 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.43□□□□□ -1.38
PDGFAP04085 AL732372.2-207ENST00000445840 183 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFAP04085 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.43□□□□□ -1.38
PDGFAP04085 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFAP04085 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFAP04085 SEPT14P2-201ENST00000453405 183 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 SBDSP1-204ENST00000453858 737 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 RNU6-420P-201ENST00000458780 107 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFAP04085 AC068522.1-201ENST00000482895 345 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFAP04085 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFAP04085 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFAP04085 AC111000.3-201ENST00000508057 576 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 SEPT14P4-201ENST00000513445 186 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 Vault.3-201ENST00000516676 95 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFAP04085 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.43□□□□□ -1.38
PDGFAP04085 COX6CP8-201ENST00000522620 226 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFAP04085 FO082796.1-201ENST00000523795 183 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 OR5M2P-201ENST00000529003 936 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.43□□□□□ -1.38
PDGFAP04085 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFAP04085 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 MIR4795-201ENST00000584182 89 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFAP04085 AC063962.1-201ENST00000608199 521 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFAP04085 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PDGFAP04085 AL591926.1-201ENST00000620542 217 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 AC089999.3-201ENST00000622440 577 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 AC068213.1-201ENST00000625124 226 ntBASIC6.43□□□□□ -1.38
PDGFAP04085 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFAP04085 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.43□□□□□ -1.38
PDGFAP04085 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
PDGFAP04085 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.43□□□□□ -1.38
PDGFAP04085 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PDGFAP04085 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFAP04085 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
PDGFAP04085 TTC41P-205ENST00000551270 3963 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.42□□□□□ -1.38
PDGFAP04085 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
PDGFAP04085 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFAP04085 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms