Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.7□□□□□ -1.66
RIPK2O43353 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RIPK2O43353 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RIPK2O43353 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RIPK2O43353 AC135352.1-201ENST00000506173 1418 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.7□□□□□ -1.66
RIPK2O43353 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RIPK2O43353 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK2O43353 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RIPK2O43353 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK2O43353 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RIPK2O43353 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RIPK2O43353 AL442639.1-201ENST00000625030 1899 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 AL139811.1-201ENST00000424779 2299 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 RN7SKP162-201ENST00000363605 345 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 AL607077.1-201ENST00000401718 499 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 VN1R8P-201ENST00000407739 893 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.69□□□□□ -1.66
RIPK2O43353 AC004690.1-201ENST00000418216 328 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RIPK2O43353 DPY19L1P2-201ENST00000426647 915 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 Z99127.2-201ENST00000441426 334 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.69□□□□□ -1.66
RIPK2O43353 AC023512.1-201ENST00000444513 499 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK2O43353 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK2O43353 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.69□□□□□ -1.66
RIPK2O43353 AC026348.1-201ENST00000462549 1053 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 BX284632.1-201ENST00000478218 541 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 RN7SL727P-201ENST00000482164 296 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RIPK2O43353 AC140172.1-201ENST00000502928 141 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK2O43353 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RIPK2O43353 IGLVIV-64-201ENST00000518581 301 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 MORF4L1P3-201ENST00000525966 950 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 DEFB109D-201ENST00000529497 240 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.69□□□□□ -1.66
RIPK2O43353 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK2O43353 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.69□□□□□ -1.66
RIPK2O43353 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK2O43353 AC011487.3-201ENST00000593607 453 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 ABI1P1-201ENST00000603375 1120 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 AC010201.1-201ENST00000605051 540 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 FAM27B-201ENST00000610601 213 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 AC011472.4-201ENST00000615848 491 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.69□□□□□ -1.66
RIPK2O43353 AC091905.2-201ENST00000623143 306 ntBASIC4.69□□□□□ -1.66
RIPK2O43353 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK2O43353 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK2O43353 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RIPK2O43353 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RIPK2O43353 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK2O43353 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK2O43353 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RIPK2O43353 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RIPK2O43353 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
RIPK2O43353 AL391684.1-202ENST00000641293 1636 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.68□□□□□ -1.66
RIPK2O43353 Z98755.1-201ENST00000407015 1384 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK2O43353 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK2O43353 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK2O43353 AC067945.1-201ENST00000342609 618 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.68□□□□□ -1.66
RIPK2O43353 RN7SKP160-201ENST00000363804 340 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.68□□□□□ -1.66
RIPK2O43353 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.68□□□□□ -1.66
RIPK2O43353 RNU6-1279P-201ENST00000383917 103 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
RIPK2O43353 AL160275.2-201ENST00000412010 394 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.68□□□□□ -1.66
RIPK2O43353 RPL24P2-201ENST00000421023 475 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 GTF2IP2-201ENST00000424290 697 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 NDUFA5P10-201ENST00000432147 357 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.68□□□□□ -1.66
RIPK2O43353 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK2O43353 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK2O43353 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.68□□□□□ -1.66
RIPK2O43353 AC006967.1-201ENST00000467608 589 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.68□□□□□ -1.66
RIPK2O43353 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RIPK2O43353 AC004980.4-201ENST00000513375 203 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 SCARNA21.2-201ENST00000516600 166 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.68□□□□□ -1.66
RIPK2O43353 IGKV2-18-201ENST00000522607 343 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.68□□□□□ -1.66
RIPK2O43353 OR5AN2P-201ENST00000534535 896 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.68□□□□□ -1.66
RIPK2O43353 NDUFA5P11-201ENST00000567995 343 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 AP005119.2-201ENST00000579735 1105 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 VN1R84P-201ENST00000593697 235 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.68□□□□□ -1.66
RIPK2O43353 OR7A19P-201ENST00000608051 733 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 AC008115.4-201ENST00000619780 775 ntBASIC4.68□□□□□ -1.66
RIPK2O43353 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK2O43353 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK2O43353 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK2O43353 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK2O43353 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms