Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 RNA5SP509-201ENST00000364577 119 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 RNA5SP372-201ENST00000390836 115 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 OR1F12-201ENST00000402365 945 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 RPL17P36-201ENST00000420302 549 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 GLUD1P9-201ENST00000420997 1173 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 RPEP3-201ENST00000425462 676 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 RPS26P2-201ENST00000440331 348 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 SEPT14P1-201ENST00000458703 648 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC011276.1-201ENST00000469688 323 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC090589.1-201ENST00000473109 362 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 MTND4LP2-201ENST00000502312 285 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AP001781.1-201ENST00000530977 207 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 RPL21P7-201ENST00000557463 483 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC073091.2-201ENST00000603205 907 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL137072.1-201ENST00000603444 466 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC090948.1-201ENST00000607464 549 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC140113.4-201ENST00000622087 222 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL606537.1-201ENST00000607258 2011 ntBASIC4.48□□□□□ -1.69
TMX2-CTNND1H3BSU7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL121950.1-201ENST00000624993 2077 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 RAD17P1-201ENST00000418130 2042 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC009237.10-201ENST00000414112 510 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 VN1R37P-201ENST00000419096 748 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC234781.4-201ENST00000419384 244 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 OR2X1P-201ENST00000421144 687 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 GTF2IP2-201ENST00000424290 697 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL606490.8-201ENST00000441624 319 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 MTCYBP21-201ENST00000443300 1113 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC079168.2-201ENST00000453977 416 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 RPL23AP24-201ENST00000458203 385 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 RN7SL810P-201ENST00000493031 276 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 STMN1P2-201ENST00000508435 439 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 IGLV3-26-201ENST00000520756 302 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC022882.1-201ENST00000532142 501 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC023575.1-201ENST00000580510 358 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC115286.1-201ENST00000604298 434 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC073137.1-201ENST00000605636 634 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 MTCO1P22-201ENST00000604619 1360 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL592182.3-201ENST00000642132 3304 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 DHX9P1-201ENST00000436565 3076 ntBASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
TMX2-CTNND1H3BSU7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms