Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPS3AP4-201ENST00000555161 764 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC084757.1-201ENST00000559987 490 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC092325.1-201ENST00000566449 554 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 MIR4675-201ENST00000577898 77 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 MIR4433B-201ENST00000581329 102 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC115085.1-201ENST00000588924 229 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC090578.1-201ENST00000604955 591 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AL121612.2-201ENST00000612261 482 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC091834.1-201ENST00000614543 472 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 CR381653.2-201ENST00000624041 768 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AL139384.2-201ENST00000613809 3590 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 GAPDHP42-201ENST00000406848 981 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AL450338.1-201ENST00000407987 512 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 HMGB3P23-201ENST00000414981 585 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AL807761.1-201ENST00000417622 171 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 CYCSP52-201ENST00000422857 310 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 IPMKP1-201ENST00000425988 855 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 MTND1P2-201ENST00000430604 821 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 SKP1P1-201ENST00000438081 489 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 MTATP6P30-201ENST00000443540 664 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC244505.5-201ENST00000443639 207 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 RPL7P36-201ENST00000444633 681 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AL139156.3-201ENST00000454802 394 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC027673.1-201ENST00000456245 405 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 RPL21P6-201ENST00000479171 504 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 RN7SL547P-201ENST00000490793 290 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC105252.1-201ENST00000503089 286 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC024558.1-201ENST00000505008 528 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 BGLT3-201ENST00000564523 994 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 LSM1P2-201ENST00000604911 322 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AP001784.1-201ENST00000624107 428 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 AC009948.3-201ENST00000603415 1798 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 OR4G11P-202ENST00000642116 1414 ntBASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.18□□□□□ -1.26
TMEM88BA6NKF7 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms