Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 KNOP1P3-201ENST00000446933 426 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AL354714.3-201ENST00000447284 493 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 ZNF886P-201ENST00000450781 723 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 GYG1P1-201ENST00000460864 698 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 RN7SL174P-201ENST00000475578 289 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 BX284632.1-201ENST00000478218 541 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC010627.1-201ENST00000503819 1294 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC008837.1-201ENST00000511513 412 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 DUXAP5-201ENST00000529668 529 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 OR7E128P-201ENST00000532736 1024 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC006518.2-201ENST00000542513 940 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC008083.2-201ENST00000546707 476 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC027104.1-201ENST00000563702 681 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 MIR3936-201ENST00000584304 110 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 RN7SL435P-201ENST00000584418 282 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC002487.1-201ENST00000604565 994 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC005377.1-201ENST00000605126 456 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC126915.2-201ENST00000610957 190 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC123767.1-202ENST00000620407 817 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC099494.2-201ENST00000623371 978 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AL133268.1-201ENST00000405676 1401 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC099786.3-201ENST00000565735 1410 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 RLIMP2-201ENST00000427891 1563 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 VPS35P1-201ENST00000563400 1518 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 MIR323A-201ENST00000362199 86 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 RNU4-28P-201ENST00000364739 141 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 MIR320B1-201ENST00000390209 79 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 HMGB3P7-201ENST00000400214 611 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AL021331.1-201ENST00000402817 582 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AL512422.1-201ENST00000407033 553 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 RN7SKP97-201ENST00000410966 333 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC013404.1-201ENST00000413068 249 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 MTCO2P21-201ENST00000419780 677 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 CKS1BP6-201ENST00000424932 240 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 CR769776.1-201ENST00000441254 787 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC099063.2-201ENST00000446360 662 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AL389915.2-201ENST00000454576 441 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 RPL7P32-201ENST00000457119 744 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC110749.1-201ENST00000462007 357 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC097484.1-201ENST00000471148 389 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 RN7SL101P-201ENST00000496350 279 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC119751.1-201ENST00000513357 765 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 RNA5SP43-201ENST00000516559 110 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 RNA5SP392-201ENST00000516905 112 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 ELOCP35-201ENST00000604289 336 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AL049794.2-201ENST00000616301 365 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC048344.4-201ENST00000619744 527 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms