Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 RPL7P57-201ENST00000423238 740 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 RPL12P34-201ENST00000424532 479 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 TRIM60P13-201ENST00000432350 1283 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC093414.1-201ENST00000434712 514 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 RPL12P46-201ENST00000436610 195 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 HMGB1P26-201ENST00000452520 628 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC007998.1-201ENST00000474156 672 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 RN7SL222P-201ENST00000476452 299 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 RN7SL727P-201ENST00000482164 296 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC116562.1-201ENST00000485355 781 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC022404.1-201ENST00000555320 273 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC008759.1-201ENST00000589783 983 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AL121932.1-201ENST00000605542 214 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC242628.1-201ENST00000606810 391 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC010424.2-201ENST00000607594 443 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AL669942.2-201ENST00000620352 697 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AL359757.1-201ENST00000623176 255 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AC134882.1-201ENST00000603738 1676 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 PPCS-201ENST00000372556 984 ntTSL 2 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AL357515.1-201ENST00000402967 542 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 Z86062.1-201ENST00000406773 777 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 RNA5SP345-201ENST00000410646 108 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 TRGV6-201ENST00000417928 299 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 CYP4F29P-201ENST00000420685 446 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 RPS17P8-201ENST00000434525 335 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 RPL7P28-201ENST00000437739 740 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 DNAJA1P5-201ENST00000440278 943 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC011753.3-201ENST00000443436 406 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 MTND3P4-201ENST00000453537 303 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC026348.1-201ENST00000462549 1053 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 RPS26P28-201ENST00000470806 348 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC097484.1-201ENST00000471148 389 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 RPL7P39-201ENST00000481157 744 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 RN7SL170P-201ENST00000487098 295 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 IGLVIV-64-201ENST00000518581 301 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 DEFB109D-201ENST00000529497 240 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 OR7E128P-201ENST00000532736 1024 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 FKBP1BP1-201ENST00000553366 325 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AL139395.1-201ENST00000603662 160 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AL499605.1-201ENST00000604628 403 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC079791.1-201ENST00000605356 973 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC020634.1-201ENST00000608701 549 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC109309.2-201ENST00000612597 332 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 AC006971.1-201ENST00000407916 4486 ntBASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.95□□□□□ -1.78
KCNIP3Q9Y2W7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms