Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 RNA5SP132-201ENST00000364725 118 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 RNU6-178P-201ENST00000384631 104 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 U3.25-201ENST00000391209 220 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 LRRC37BP1-201ENST00000398851 714 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AC009804.1-201ENST00000400949 179 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AL359643.1-201ENST00000404109 423 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 SSR1P2-201ENST00000415208 787 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 TMBIM7P-201ENST00000418074 855 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 BTF3P9-201ENST00000418784 283 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AC073052.1-201ENST00000440417 714 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AL450023.3-201ENST00000440592 271 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AC018638.3-201ENST00000461273 132 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AC037198.2-201ENST00000478845 733 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 RPL7P39-201ENST00000481157 744 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 HPRT1P1-201ENST00000509498 657 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AC010376.1-201ENST00000522101 334 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AP002802.2-201ENST00000605877 235 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AC109309.2-201ENST00000612597 332 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 VN1R9P-201ENST00000614184 867 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AL590396.4-201ENST00000636779 956 ntBASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MRPS28Q9Y2Q9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 SMG1P6-201ENST00000532337 2930 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC083843.3-201ENST00000623679 2186 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 UBBP2-201ENST00000376781 231 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 SNORA70.10-201ENST00000384515 134 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 RNU6-298P-201ENST00000390888 96 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 SNORA77-201ENST00000408716 125 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 RN7SKP125-201ENST00000410481 302 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AL590609.2-201ENST00000421430 368 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 BX323845.1-201ENST00000432417 179 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AL353898.1-201ENST00000444055 238 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 PTMAP3-201ENST00000447474 330 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 HMGB1P5-202ENST00000451497 985 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC243772.1-201ENST00000451620 410 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 OR2AF1P-201ENST00000454899 889 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 HMGB1P4-201ENST00000455362 567 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 CYCSP34-201ENST00000458172 304 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC112206.1-201ENST00000468416 477 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 RN7SL799P-201ENST00000475891 298 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 OR2AO1P-201ENST00000476497 403 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 SYT14P1-201ENST00000481459 721 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC108693.1-201ENST00000496068 432 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 RNA5SP362-201ENST00000516048 118 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 RN7SKP265-201ENST00000516448 223 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC034205.1-201ENST00000520621 638 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC012339.2-201ENST00000523996 453 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 OR8G5-201ENST00000524943 1041 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC109635.6-201ENST00000525487 1113 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms