Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 TOMM20P1-201ENST00000534518 427 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 CENPUP2-201ENST00000555897 1186 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC127024.5-201ENST00000580085 462 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 MIR4433B-201ENST00000581329 102 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC010680.3-201ENST00000604215 520 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AL161729.4-201ENST00000604650 476 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 TAS2R6P-201ENST00000605022 826 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AP004247.3-201ENST00000608682 624 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AL590282.1-201ENST00000610379 1136 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC136475.10-201ENST00000620253 385 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AL359880.1-201ENST00000621879 266 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 CRYM-AS1-204ENST00000637983 556 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC140479.2-201ENST00000421567 3130 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AL354854.1-201ENST00000455940 1363 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC104966.1-201ENST00000467010 1464 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 MAPK10-261ENST00000641050 3109 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC007996.1-201ENST00000620414 2821 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 ZNF658B-201ENST00000602828 3408 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 FUNDC2P3-201ENST00000334716 533 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 RNU6-462P-201ENST00000362659 105 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CNTN3Q9P232 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC025750.1-201ENST00000399891 379 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 RNA5SP115-201ENST00000411160 107 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC109780.2-201ENST00000413467 845 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 HMGB1P11-201ENST00000413899 637 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 NUP35P2-201ENST00000416748 943 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 VDAC1P6-201ENST00000430062 855 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 ZYG11AP1-201ENST00000430329 837 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 PSMD10P2-201ENST00000432890 672 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC073614.1-201ENST00000438690 650 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AL138899.2-201ENST00000439139 499 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 RPL7P48-201ENST00000461513 746 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 RNY4P37-201ENST00000516225 96 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 RNU6-430P-201ENST00000517078 107 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AP001858.2-201ENST00000536213 601 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 HMGN2P47-201ENST00000559378 272 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AL138976.2-201ENST00000563989 694 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AL133457.1-201ENST00000564251 987 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC138915.2-201ENST00000569776 97 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC137800.2-201ENST00000574375 120 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 MIR3913-1-201ENST00000577744 102 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC063977.5-201ENST00000601044 974 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AP001823.1-201ENST00000604056 1003 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AL591167.1-201ENST00000607321 456 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC055764.2-201ENST00000610089 670 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC145207.9-201ENST00000623802 325 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CNTN3Q9P232 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CNTN3Q9P232 AC117529.2-201ENST00000512159 2068 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 BRAFP1-201ENST00000445336 2703 ntBASIC6.79□□□□□ -1.32
CNTN3Q9P232 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.79□□□□□ -1.32
CNTN3Q9P232 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms