Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL20A1Q9P218 CASC19-284ENST00000642142 1868 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL20A1Q9P218 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL20A1Q9P218 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL20A1Q9P218 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 RN7SKP115-201ENST00000363177 317 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL20A1Q9P218 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 SNORA70.10-201ENST00000384515 134 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL20A1Q9P218 AL035079.1-201ENST00000405210 287 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 TCEA1P4-201ENST00000415066 844 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 MTND4P3-201ENST00000417829 541 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL20A1Q9P218 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC092648.1-201ENST00000425870 423 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 USP9YP9-201ENST00000429406 715 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC073648.4-201ENST00000442655 781 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 HMGB1P4-201ENST00000455362 567 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 RPS29P33-201ENST00000456717 146 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AL139824.2-201ENST00000458731 1095 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 METTL15P1-201ENST00000481421 1045 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC007686.1-201ENST00000488511 463 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 GAPDHP56-201ENST00000506031 988 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC002456.2-201ENST00000509356 380 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC008837.1-201ENST00000511513 412 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC137768.1-201ENST00000549998 553 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC087897.1-201ENST00000550134 156 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 BGLT3-201ENST00000564523 994 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC095057.3-201ENST00000567102 1157 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 AL365400.2-201ENST00000605604 902 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC009464.1-201ENST00000615731 469 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 AP000676.4-201ENST00000624659 623 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 GTF2H2B-203ENST00000508065 1432 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL20A1Q9P218 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COL20A1Q9P218 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL20A1Q9P218 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL20A1Q9P218 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL20A1Q9P218 AC073055.1-201ENST00000456901 1621 ntBASIC5.7□□□□□ -1.5
COL20A1Q9P218 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL20A1Q9P218 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL20A1Q9P218 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL20A1Q9P218 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL20A1Q9P218 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL20A1Q9P218 AC099786.3-201ENST00000565735 1410 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 ANKRD36P1-201ENST00000344424 659 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 SNORD65C-201ENST00000390962 71 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL20A1Q9P218 AC013404.1-201ENST00000413068 249 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 RPL26P29-201ENST00000415623 438 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 MTND1P26-201ENST00000440488 538 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 AL450023.3-201ENST00000440592 271 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 OR10R1P-201ENST00000441524 1141 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 GAPDHP14-201ENST00000450472 937 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 AC037198.2-201ENST00000478845 733 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 AC104687.1-201ENST00000485829 412 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 AC093752.1-206ENST00000511823 336 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 AC098976.1-201ENST00000513014 541 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 OR8I1P-201ENST00000529291 931 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL20A1Q9P218 SMG1P7-201ENST00000565246 2704 ntBASIC5.69□□□□□ -1.5
COL20A1Q9P218 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL20A1Q9P218 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
COL20A1Q9P218 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms