Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC008897.1-201ENST00000494006 347 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AC016550.1-201ENST00000505348 785 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 IGKV1-32-201ENST00000519290 311 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 OR5D15P-201ENST00000531671 942 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AC092868.3-201ENST00000560515 784 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AC079148.1-201ENST00000565944 819 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AL160290.3-201ENST00000604869 165 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AL021707.7-201ENST00000607991 416 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AC079298.2-201ENST00000623885 459 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 CR382285.2-201ENST00000624662 1495 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AC108467.2-201ENST00000617640 1597 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 ICE2P1-201ENST00000512800 1849 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 MAPK10-303ENST00000641324 3959 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AP000568.1-201ENST00000282964 442 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC009237.10-201ENST00000414112 510 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC062016.2-201ENST00000420950 676 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AL354692.1-201ENST00000423044 315 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AL049745.1-201ENST00000433953 286 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 XKRY2-201ENST00000442362 1093 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC010326.1-201ENST00000462726 602 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC092902.1-201ENST00000486999 259 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 HMGB1P47-201ENST00000511281 589 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AP001781.1-201ENST00000530977 207 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC120053.1-201ENST00000607706 736 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 AL391834.1-201ENST00000609609 560 ntBASIC4.84□□□□□ -1.63
SIX2Q9NPC8 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX2Q9NPC8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.84□□□□□ -1.64
SIX2Q9NPC8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 SNORA71.2-201ENST00000364941 134 ntBASIC4.83□□□□□ -1.64
SIX2Q9NPC8 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 RNU1-44P-201ENST00000384453 163 ntBASIC4.83□□□□□ -1.64
SIX2Q9NPC8 SDHCP2-201ENST00000398565 501 ntBASIC4.83□□□□□ -1.64
SIX2Q9NPC8 HDGFP1-201ENST00000405943 252 ntBASIC4.83□□□□□ -1.64
SIX2Q9NPC8 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.83□□□□□ -1.64
SIX2Q9NPC8 HSPE1P16-201ENST00000426640 348 ntBASIC4.83□□□□□ -1.64
SIX2Q9NPC8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms