Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
TRIM54Q9BYV2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.4□□□□□ -1.55
TRIM54Q9BYV2 TTC39DP-201ENST00000416781 1688 ntBASIC5.4□□□□□ -1.55
TRIM54Q9BYV2 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.4□□□□□ -1.55
TRIM54Q9BYV2 AL606537.1-201ENST00000607258 2011 ntBASIC5.4□□□□□ -1.55
TRIM54Q9BYV2 AC010266.2-201ENST00000564741 3255 ntBASIC5.4□□□□□ -1.55
TRIM54Q9BYV2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 Y_RNA.169-201ENST00000363745 96 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 RNA5SP122-201ENST00000384457 108 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 IPPKP1-201ENST00000422501 768 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 MTCO3P21-201ENST00000430791 643 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 EEF1B2P6-201ENST00000445713 673 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 VDAC2P4-201ENST00000452925 711 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC011979.1-201ENST00000472300 483 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 RN7SL583P-201ENST00000475692 287 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AL161747.1-201ENST00000480068 358 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 GAPDHP39-201ENST00000481866 979 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 RPS3AP22-201ENST00000488297 769 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 IGBP1P5-201ENST00000507524 1000 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC010486.3-201ENST00000511602 785 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 SNORD46.2-201ENST00000516021 102 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC092747.2-201ENST00000545069 983 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC010198.2-201ENST00000550612 259 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC090751.1-201ENST00000566966 267 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC004223.2-201ENST00000590309 544 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC022509.4-201ENST00000621404 572 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC074140.1-201ENST00000621617 208 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC016717.3-201ENST00000624730 554 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 HSPA8P17-201ENST00000427029 1382 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC096656.1-201ENST00000623826 1364 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 AP005901.5-201ENST00000545779 1796 ntBASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TRIM54Q9BYV2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AL353796.1-201ENST00000561542 3241 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 RNU6-707P-201ENST00000364647 95 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 RNA5SP284-201ENST00000384547 118 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC002524.1-201ENST00000411687 547 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AL009174.1-201ENST00000426577 416 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms