Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 AC008739.3-201ENST00000603262 127 ntBASIC6.64□□□□□ -1.35
SCAPERQ9BY12 FAM27D1-201ENST00000612308 341 ntBASIC6.64□□□□□ -1.35
SCAPERQ9BY12 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 RNU1-14P-201ENST00000362759 152 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 RNA5SP372-201ENST00000390836 115 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 PVALB-202ENST00000404171 422 ntTSL 2 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 RN7SKP235-201ENST00000410662 305 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 RPL6P29-201ENST00000414863 865 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 KATNBL1P2-201ENST00000433311 835 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 AK4P6-201ENST00000505168 528 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 OR5BC1P-201ENST00000529327 739 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 DYNLL1P4-201ENST00000549314 266 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 MIR3944-201ENST00000581277 108 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 ADAD1P2-201ENST00000588476 646 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 AL161756.2-201ENST00000604597 246 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 AL133243.3-201ENST00000617415 3004 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 AP005435.3-201ENST00000531260 3198 ntBASIC6.63□□□□□ -1.35
SCAPERQ9BY12 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
SCAPERQ9BY12 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SCAPERQ9BY12 GVINP1-202ENST00000531871 7271 ntBASIC6.62□□□□□ -1.35
SCAPERQ9BY12 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
SCAPERQ9BY12 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SCAPERQ9BY12 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SCAPERQ9BY12 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SCAPERQ9BY12 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SCAPERQ9BY12 RNA5SP124-201ENST00000362739 110 ntBASIC6.62□□□□□ -1.35
SCAPERQ9BY12 CRYBB2P1-203ENST00000415709 538 ntBASIC6.62□□□□□ -1.35
SCAPERQ9BY12 OR8F1P-201ENST00000425243 930 ntBASIC6.62□□□□□ -1.35
SCAPERQ9BY12 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.62□□□□□ -1.35
SCAPERQ9BY12 AC010460.1-201ENST00000507087 466 ntBASIC6.62□□□□□ -1.35
SCAPERQ9BY12 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.62□□□□□ -1.35
SCAPERQ9BY12 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.62□□□□□ -1.35
SCAPERQ9BY12 AC069200.1-201ENST00000609511 323 ntBASIC6.62□□□□□ -1.35
SCAPERQ9BY12 AC244100.1-202ENST00000621554 382 ntBASIC6.62□□□□□ -1.35
SCAPERQ9BY12 AL603750.1-201ENST00000624216 1717 ntBASIC6.62□□□□□ -1.35
SCAPERQ9BY12 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 AC139769.1-204ENST00000472297 1931 ntBASIC6.61□□□□□ -1.35
SCAPERQ9BY12 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 MIR449B-201ENST00000384995 97 ntBASIC6.61□□□□□ -1.35
SCAPERQ9BY12 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 CTSL3P-202ENST00000412179 788 ntBASIC6.61□□□□□ -1.35
SCAPERQ9BY12 RPL12P18-201ENST00000437175 325 ntBASIC6.61□□□□□ -1.35
SCAPERQ9BY12 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 AC026726.1-201ENST00000512859 601 ntBASIC6.61□□□□□ -1.35
SCAPERQ9BY12 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SCAPERQ9BY12 AC097374.1-203ENST00000400783 485 ntBASIC6.6□□□□□ -1.35
SCAPERQ9BY12 RNA5SP36-201ENST00000410197 133 ntBASIC6.6□□□□□ -1.35
SCAPERQ9BY12 GOT2P5-201ENST00000433995 546 ntBASIC6.6□□□□□ -1.35
SCAPERQ9BY12 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.6□□□□□ -1.35
SCAPERQ9BY12 IFITM8P-201ENST00000522529 394 ntBASIC6.6□□□□□ -1.35
SCAPERQ9BY12 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.6□□□□□ -1.35
SCAPERQ9BY12 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.6□□□□□ -1.35
SCAPERQ9BY12 CCNG2P1-201ENST00000549521 1000 ntBASIC6.6□□□□□ -1.35
SCAPERQ9BY12 AC025175.1-201ENST00000606482 759 ntBASIC6.6□□□□□ -1.35
SCAPERQ9BY12 AC099669.2-201ENST00000616549 437 ntBASIC6.6□□□□□ -1.35
SCAPERQ9BY12 CR392039.5-201ENST00000623201 510 ntBASIC6.6□□□□□ -1.35
SCAPERQ9BY12 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCAPERQ9BY12 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCAPERQ9BY12 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCAPERQ9BY12 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SCAPERQ9BY12 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCAPERQ9BY12 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCAPERQ9BY12 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCAPERQ9BY12 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.6□□□□□ -1.35
SCAPERQ9BY12 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCAPERQ9BY12 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms