Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX3Q99909 RPL12P9-201ENST00000412942 488 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.35□□□□□ -1.71
SSX3Q99909 BMS1P13-201ENST00000417301 885 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX3Q99909 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSX3Q99909 OR2AH1P-201ENST00000425717 928 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AL139148.1-201ENST00000427122 680 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX3Q99909 DYNLL1P7-201ENST00000429273 258 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 CEACAMP1-201ENST00000434624 1035 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC092754.1-201ENST00000472975 479 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC079841.1-201ENST00000481228 950 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC104687.1-201ENST00000485829 412 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 RPL30P11-201ENST00000495304 339 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AC072052.1-201ENST00000496556 306 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AC111193.1-201ENST00000504097 155 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC091912.1-201ENST00000511351 248 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX3Q99909 IGKV2-36-201ENST00000519999 223 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC100784.1-201ENST00000522790 310 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX3Q99909 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSX3Q99909 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX3Q99909 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX3Q99909 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX3Q99909 ADAD1P2-201ENST00000588476 646 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX3Q99909 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC005034.4-201ENST00000603612 899 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AC079880.2-201ENST00000603790 1213 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX3Q99909 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX3Q99909 AC109583.2-201ENST00000617367 129 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AC009237.17-201ENST00000618111 748 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AC067852.7-201ENST00000623270 535 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AP002505.2-201ENST00000623585 696 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 AC073869.8-201ENST00000641806 335 ntBASIC4.35□□□□□ -1.71
SSX3Q99909 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX3Q99909 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX3Q99909 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX3Q99909 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX3Q99909 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX3Q99909 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SSX3Q99909 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SSX3Q99909 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX3Q99909 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSX3Q99909 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SSX3Q99909 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX3Q99909 AL450345.1-202ENST00000605741 3881 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
SSX3Q99909 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX3Q99909 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSX3Q99909 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX3Q99909 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
SSX3Q99909 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSX3Q99909 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SSX3Q99909 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX3Q99909 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX3Q99909 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX3Q99909 RNU6-792P-201ENST00000363490 107 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 OR1L6-202ENST00000373684 1044 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 BRWD1P3-201ENST00000428816 390 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 LYPLA1P1-201ENST00000434514 622 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 OR52B5P-201ENST00000435337 951 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX3Q99909 CNOT7P2-201ENST00000441051 832 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 RNFT1P2-201ENST00000443064 757 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 RPS27P5-201ENST00000444247 244 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 AC069540.1-201ENST00000446320 988 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 GAPDHP25-201ENST00000447061 1001 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 NDUFS5P3-201ENST00000450668 321 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 RPL7P40-201ENST00000481703 745 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSX3Q99909 RN7SL205P-201ENST00000490174 284 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX3Q99909 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSX3Q99909 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.34□□□□□ -1.71
SSX3Q99909 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX3Q99909 OR5M14P-201ENST00000506803 618 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX3Q99909 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX3Q99909 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX3Q99909 OR4R2P-201ENST00000530815 597 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 AP004607.2-201ENST00000533949 322 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX3Q99909 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX3Q99909 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX3Q99909 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 524.2 ms