Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 MIR3908-201ENST00000579798 126 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 AC026979.4-201ENST00000606555 645 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 5S_rRNA.16-201ENST00000612928 119 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 AL354696.1-201ENST00000614652 497 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 AC005261.2-201ENST00000593427 4258 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC004448.2-201ENST00000422360 586 ntBASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 TXNP2-201ENST00000443918 295 ntBASIC6.3□□□□□ -1.4
SIN3AQ96ST3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AL023583.1-201ENST00000607518 1143 ntBASIC6.3□□□□□ -1.4
SIN3AQ96ST3 AL021997.2-201ENST00000615674 271 ntBASIC6.3□□□□□ -1.4
SIN3AQ96ST3 OR4G1P-202ENST00000641173 1788 ntBASIC6.3□□□□□ -1.4
SIN3AQ96ST3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.3□□□□□ -1.4
SIN3AQ96ST3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AL589826.1-201ENST00000340697 249 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 DHFRP5-201ENST00000406944 564 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AL157831.1-201ENST00000426134 473 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 MTND2P3-201ENST00000452458 470 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AC079804.1-201ENST00000461922 436 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AC026979.1-201ENST00000492525 396 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 RN7SL810P-201ENST00000493031 276 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 MIR4433B-201ENST00000581329 102 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 GMCL1P2-201ENST00000605230 823 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 MIR6810-201ENST00000622701 70 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 OR52H1-202ENST00000641796 1061 ntBASIC6.29□□□□□ -1.4
SIN3AQ96ST3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SIN3AQ96ST3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SIN3AQ96ST3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SIN3AQ96ST3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC6.28□□□□□ -1.4
SIN3AQ96ST3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SIN3AQ96ST3 AL442128.2-201ENST00000620246 1824 ntBASIC6.28□□□□□ -1.4
SIN3AQ96ST3 MAPK10-303ENST00000641324 3959 ntBASIC6.28□□□□□ -1.4
SIN3AQ96ST3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SIN3AQ96ST3 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SIN3AQ96ST3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
SIN3AQ96ST3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.28□□□□□ -1.4
SIN3AQ96ST3 AC016397.1-201ENST00000412463 242 ntBASIC6.28□□□□□ -1.4
SIN3AQ96ST3 AL356968.2-201ENST00000412769 1257 ntBASIC6.28□□□□□ -1.4
SIN3AQ96ST3 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms