Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RPL5P12-201ENST00000477071 851 ntBASIC7.15□□□□□ -1.27
IFT140Q96RY7 ATP1B1P1-201ENST00000509767 915 ntBASIC7.15□□□□□ -1.27
IFT140Q96RY7 AC119751.5-201ENST00000514077 770 ntBASIC7.15□□□□□ -1.27
IFT140Q96RY7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC7.15□□□□□ -1.27
IFT140Q96RY7 AL021997.2-201ENST00000615674 271 ntBASIC7.15□□□□□ -1.27
IFT140Q96RY7 FP325313.1-201ENST00000638228 703 ntBASIC7.15□□□□□ -1.27
IFT140Q96RY7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
IFT140Q96RY7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
IFT140Q96RY7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC7.15□□□□□ -1.27
IFT140Q96RY7 VPS35P1-201ENST00000563400 1518 ntBASIC7.15□□□□□ -1.27
IFT140Q96RY7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
IFT140Q96RY7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
IFT140Q96RY7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
IFT140Q96RY7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
IFT140Q96RY7 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
IFT140Q96RY7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
IFT140Q96RY7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
IFT140Q96RY7 RNA5SP360-201ENST00000516555 118 ntBASIC7.14□□□□□ -1.27
IFT140Q96RY7 SNORA70.24-201ENST00000517233 118 ntBASIC7.14□□□□□ -1.27
IFT140Q96RY7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
IFT140Q96RY7 A2MP1-204ENST00000566278 4130 ntBASIC7.14□□□□□ -1.27
IFT140Q96RY7 AP001157.1-201ENST00000550837 2339 ntBASIC7.14□□□□□ -1.27
IFT140Q96RY7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
IFT140Q96RY7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
IFT140Q96RY7 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
IFT140Q96RY7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
IFT140Q96RY7 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
IFT140Q96RY7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC7.13□□□□□ -1.27
IFT140Q96RY7 LINC00561-201ENST00000565815 2738 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
IFT140Q96RY7 RNU6-213P-201ENST00000384051 104 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 SNORA5A-201ENST00000384111 134 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 MIR34B-201ENST00000385076 84 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 RNU4-6P-201ENST00000410804 122 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 CDY14P-201ENST00000431260 1014 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 CDY12P-201ENST00000440679 1015 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 CDY13P-201ENST00000445813 1015 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 CDY23P-201ENST00000451661 1014 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 AC021660.1-201ENST00000465006 554 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
IFT140Q96RY7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC7.13□□□□□ -1.27
IFT140Q96RY7 AL159169.3-201ENST00000608871 561 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
IFT140Q96RY7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
IFT140Q96RY7 USP9YP4-201ENST00000424401 1745 ntBASIC7.13□□□□□ -1.27
IFT140Q96RY7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC7.13□□□□□ -1.27
IFT140Q96RY7 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
IFT140Q96RY7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC7.13□□□□□ -1.27
IFT140Q96RY7 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
IFT140Q96RY7 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
IFT140Q96RY7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
IFT140Q96RY7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
IFT140Q96RY7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
IFT140Q96RY7 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.12□□□□□ -1.27
IFT140Q96RY7 RNA5SP175-201ENST00000364275 119 ntBASIC7.12□□□□□ -1.27
IFT140Q96RY7 MIR183-201ENST00000384958 110 ntBASIC7.12□□□□□ -1.27
IFT140Q96RY7 EI24P3-201ENST00000399046 1062 ntBASIC7.12□□□□□ -1.27
IFT140Q96RY7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC7.12□□□□□ -1.27
IFT140Q96RY7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
IFT140Q96RY7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
IFT140Q96RY7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.12□□□□□ -1.27
IFT140Q96RY7 CAB39P1-201ENST00000502277 460 ntBASIC7.12□□□□□ -1.27
IFT140Q96RY7 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC7.12□□□□□ -1.27
IFT140Q96RY7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC7.12□□□□□ -1.27
IFT140Q96RY7 AC107016.1-201ENST00000550463 337 ntBASIC7.12□□□□□ -1.27
IFT140Q96RY7 RPL21P12-201ENST00000559810 515 ntBASIC7.12□□□□□ -1.27
IFT140Q96RY7 AC005412.1-201ENST00000580812 1049 ntBASIC7.12□□□□□ -1.27
IFT140Q96RY7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC7.12□□□□□ -1.27
IFT140Q96RY7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
IFT140Q96RY7 AL355852.1-201ENST00000454081 1771 ntBASIC7.12□□□□□ -1.27
IFT140Q96RY7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
IFT140Q96RY7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
IFT140Q96RY7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
IFT140Q96RY7 FAM91A3P-201ENST00000456826 2544 ntBASIC7.12□□□□□ -1.27
IFT140Q96RY7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
IFT140Q96RY7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
IFT140Q96RY7 ZNF285B-201ENST00000561698 1767 ntBASIC7.12□□□□□ -1.27
IFT140Q96RY7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
IFT140Q96RY7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 AL356968.2-201ENST00000412769 1257 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 NPM1P34-201ENST00000428821 893 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 PLGLA-201ENST00000465668 449 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 AC087499.8-201ENST00000578406 226 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
IFT140Q96RY7 AC130352.1-201ENST00000602979 661 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms