Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC003973.3-201ENST00000624863 2822 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 DDX43P2-201ENST00000604753 1354 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC006206.1-201ENST00000544842 3387 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC092681.1-201ENST00000297369 291 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 RNU4-4P-201ENST00000364588 130 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 SNORA40.2-201ENST00000390847 128 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC005042.1-201ENST00000393397 800 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AL359643.1-201ENST00000404109 423 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 MTCO3P5-201ENST00000433620 714 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC096638.2-201ENST00000434965 711 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 USP9YP28-201ENST00000435142 589 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 ATP5C1P1-201ENST00000441945 895 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 ARL5AP2-201ENST00000444698 533 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 MTND2P4-201ENST00000445034 1004 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AP006222.1-205ENST00000450734 457 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AL133477.1-201ENST00000457472 514 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 RNU7-125P-201ENST00000458760 62 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 RPL7P48-201ENST00000461513 746 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC011476.1-201ENST00000466725 307 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 DUTP1-201ENST00000493631 470 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC111193.1-201ENST00000504097 155 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC113347.3-201ENST00000509113 148 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 NDUFB4P12-201ENST00000513465 390 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC008083.2-201ENST00000546707 476 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC125612.1-201ENST00000547580 377 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC079600.1-201ENST00000550326 297 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 MTCO1P40-201ENST00000574371 625 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 MRPS35P3-201ENST00000603189 709 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AL139124.1-201ENST00000609123 421 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC008121.2-201ENST00000614647 523 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 VN1R7P-201ENST00000619242 903 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC145207.9-201ENST00000623802 325 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SNX18Q96RF0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 ELL2P3-201ENST00000457883 1602 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 AC011447.7-201ENST00000624228 1590 ntBASIC5.08□□□□□ -1.6
SNX18Q96RF0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC006042.3-201ENST00000454684 1469 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC008549.2-201ENST00000333482 706 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 SNORA51.1-201ENST00000363243 140 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 UBBP2-201ENST00000376781 231 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 MIR525-201ENST00000384978 85 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC104297.1-201ENST00000393779 870 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AL354890.1-201ENST00000413730 346 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 RPL7P53-201ENST00000421245 739 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms