Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AL672167.1-205ENST00000641112 3080 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 SNORD113.2-201ENST00000364166 89 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AL592291.1-201ENST00000403830 352 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 RPS4XP9-201ENST00000405151 780 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AL590609.2-201ENST00000421430 368 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC245028.1-201ENST00000423259 256 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC011753.3-201ENST00000443436 406 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 ARL2BPP10-201ENST00000446487 531 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AL035551.1-201ENST00000446931 348 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC073587.1-201ENST00000447093 876 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC007016.1-201ENST00000512110 244 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 NPM1P6-201ENST00000521088 871 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC009303.3-201ENST00000591103 736 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC234771.5-201ENST00000600161 514 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC012213.4-201ENST00000606457 354 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AC009704.2-201ENST00000618739 483 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AP000346.3-201ENST00000622821 210 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 AL359757.1-201ENST00000623176 255 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 DHX40P1-201ENST00000588725 1412 ntBASIC4.77□□□□□ -1.65
RPRD1AQ96P16 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPRD1AQ96P16 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 AL391684.1-202ENST00000641293 1636 ntBASIC4.76□□□□□ -1.65
RPRD1AQ96P16 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 OR4K15-201ENST00000305051 1216 ntBASIC4.76□□□□□ -1.65
RPRD1AQ96P16 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 RPS3AP23-201ENST00000401762 784 ntBASIC4.76□□□□□ -1.65
RPRD1AQ96P16 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 CEACAMP9-201ENST00000442990 513 ntBASIC4.76□□□□□ -1.65
RPRD1AQ96P16 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 SEPT14P1-201ENST00000458703 648 ntBASIC4.76□□□□□ -1.65
RPRD1AQ96P16 SCARNA10-201ENST00000459255 330 ntBASIC4.76□□□□□ -1.65
RPRD1AQ96P16 AC037198.2-201ENST00000478845 733 ntBASIC4.76□□□□□ -1.65
RPRD1AQ96P16 AC111000.3-201ENST00000508057 576 ntBASIC4.76□□□□□ -1.65
RPRD1AQ96P16 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPRD1AQ96P16 ASNSP1-201ENST00000518311 1939 ntBASIC4.76□□□□□ -1.65
RPRD1AQ96P16 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.75□□□□□ -1.65
RPRD1AQ96P16 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.75□□□□□ -1.65
RPRD1AQ96P16 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RPRD1AQ96P16 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RPRD1AQ96P16 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RPRD1AQ96P16 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPRD1AQ96P16 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.75□□□□□ -1.65
RPRD1AQ96P16 AC135352.1-201ENST00000506173 1418 ntBASIC4.75□□□□□ -1.65
RPRD1AQ96P16 OR51C1P-202ENST00000641159 1444 ntBASIC4.75□□□□□ -1.65
RPRD1AQ96P16 OR10J6P-201ENST00000289731 930 ntBASIC4.75□□□□□ -1.65
RPRD1AQ96P16 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RPRD1AQ96P16 AC019155.1-201ENST00000382242 574 ntBASIC4.75□□□□□ -1.65
RPRD1AQ96P16 RNA5SP332-201ENST00000391063 115 ntBASIC4.75□□□□□ -1.65
RPRD1AQ96P16 GLULP6-201ENST00000399502 913 ntBASIC4.75□□□□□ -1.65
RPRD1AQ96P16 RN7SKP199-201ENST00000410325 305 ntBASIC4.75□□□□□ -1.65
RPRD1AQ96P16 RPA2P2-201ENST00000419698 796 ntBASIC4.75□□□□□ -1.65
RPRD1AQ96P16 RPS12P5-201ENST00000423449 371 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms