Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 OR56B2P-201ENST00000317102 954 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC067945.1-201ENST00000342609 618 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 MIR921-201ENST00000401133 56 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 CYCSP19-201ENST00000411715 316 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 SNRPFP1-201ENST00000414761 252 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 UQCRBP1-201ENST00000421129 336 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AL358232.1-201ENST00000448030 501 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC090013.1-201ENST00000485147 480 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC105233.3-201ENST00000531125 744 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC093765.1-201ENST00000603758 881 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC008966.2-201ENST00000606157 453 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC112200.1-201ENST00000625015 234 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 RNA5SP196-201ENST00000625967 102 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 MIR492-201ENST00000638676 116 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 H2AFZP5-201ENST00000446960 382 ntBASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 AC053481.1-201ENST00000467217 306 ntBASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 RPL7P19-201ENST00000469948 618 ntBASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 AC068831.4-201ENST00000556118 109 ntBASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 AC022916.3-201ENST00000592961 742 ntBASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 AC100847.1-201ENST00000611316 481 ntBASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 AL138820.1-201ENST00000617901 5305 ntBASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 EOGT-210ENST00000615922 1931 ntBASIC4.55□□□□□ -1.68
SHROOM3Q8TF72 RNU1-94P-201ENST00000362627 173 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AL132765.1-201ENST00000434165 553 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 MIR3158-1-201ENST00000583596 81 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC020634.1-201ENST00000608701 549 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC104260.2-201ENST00000623551 3497 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AL121657.1-201ENST00000327215 531 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 SDHCP2-201ENST00000398565 501 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 Z98745.1-201ENST00000402553 494 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 TMSB10P2-201ENST00000416049 131 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 RPL7AP25-201ENST00000423357 805 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 PPIAP13-201ENST00000434706 478 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 RN7SL542P-201ENST00000467147 294 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC105137.1-201ENST00000484355 562 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC027455.1-201ENST00000574104 594 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 RN7SL176P-201ENST00000580352 264 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC023762.1-201ENST00000603280 584 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC006363.1-201ENST00000603806 463 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC023043.4-201ENST00000612081 449 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms