Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.66□□□□□ -1.34
VPS8Q8N3P4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VPS8Q8N3P4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
VPS8Q8N3P4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VPS8Q8N3P4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VPS8Q8N3P4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VPS8Q8N3P4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
VPS8Q8N3P4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VPS8Q8N3P4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.65□□□□□ -1.35
VPS8Q8N3P4 Y_RNA.126-201ENST00000363382 111 ntBASIC6.65□□□□□ -1.35
VPS8Q8N3P4 RPL23AP38-201ENST00000423801 469 ntBASIC6.65□□□□□ -1.35
VPS8Q8N3P4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VPS8Q8N3P4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.65□□□□□ -1.35
VPS8Q8N3P4 RPL7AP28-201ENST00000464513 571 ntBASIC6.65□□□□□ -1.35
VPS8Q8N3P4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.65□□□□□ -1.35
VPS8Q8N3P4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.65□□□□□ -1.35
VPS8Q8N3P4 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.65□□□□□ -1.35
VPS8Q8N3P4 OR7E10P-201ENST00000526420 991 ntBASIC6.65□□□□□ -1.35
VPS8Q8N3P4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VPS8Q8N3P4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.65□□□□□ -1.35
VPS8Q8N3P4 AC067959.1-201ENST00000604334 379 ntBASIC6.65□□□□□ -1.35
VPS8Q8N3P4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.65□□□□□ -1.35
VPS8Q8N3P4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.35
VPS8Q8N3P4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
VPS8Q8N3P4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 AL035696.2-201ENST00000407941 709 ntBASIC6.64□□□□□ -1.35
VPS8Q8N3P4 RN7SKP182-201ENST00000410772 298 ntBASIC6.64□□□□□ -1.35
VPS8Q8N3P4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 RN7SL604P-201ENST00000492589 296 ntBASIC6.64□□□□□ -1.35
VPS8Q8N3P4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 AC022655.2-201ENST00000577280 318 ntBASIC6.64□□□□□ -1.35
VPS8Q8N3P4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 5S_rRNA.16-201ENST00000612928 119 ntBASIC6.64□□□□□ -1.35
VPS8Q8N3P4 SNX18P1Y-201ENST00000616231 511 ntBASIC6.64□□□□□ -1.35
VPS8Q8N3P4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
VPS8Q8N3P4 AC010266.2-201ENST00000564741 3255 ntBASIC6.63□□□□□ -1.35
VPS8Q8N3P4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 TPT1P2-201ENST00000413105 503 ntBASIC6.63□□□□□ -1.35
VPS8Q8N3P4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 RPS27AP12-201ENST00000429552 465 ntBASIC6.63□□□□□ -1.35
VPS8Q8N3P4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 AF213884.1-201ENST00000488102 463 ntBASIC6.63□□□□□ -1.35
VPS8Q8N3P4 KCTD9P2-201ENST00000512203 1013 ntBASIC6.63□□□□□ -1.35
VPS8Q8N3P4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 TVP23BP1-201ENST00000557500 617 ntBASIC6.63□□□□□ -1.35
VPS8Q8N3P4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 AC026979.4-201ENST00000606555 645 ntBASIC6.63□□□□□ -1.35
VPS8Q8N3P4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 TMEM30CP-203ENST00000637814 1035 ntBASIC6.63□□□□□ -1.35
VPS8Q8N3P4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS8Q8N3P4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
VPS8Q8N3P4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VPS8Q8N3P4 AC067945.1-201ENST00000342609 618 ntBASIC6.62□□□□□ -1.35
VPS8Q8N3P4 RPS26P8-201ENST00000393490 348 ntBASIC6.62□□□□□ -1.35
VPS8Q8N3P4 EIF4A1P3-201ENST00000411521 244 ntBASIC6.62□□□□□ -1.35
VPS8Q8N3P4 AL132765.1-201ENST00000434165 553 ntBASIC6.62□□□□□ -1.35
VPS8Q8N3P4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.62□□□□□ -1.35
VPS8Q8N3P4 AC012158.1-204ENST00000483430 465 ntBASIC6.62□□□□□ -1.35
VPS8Q8N3P4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.62□□□□□ -1.35
VPS8Q8N3P4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.62□□□□□ -1.35
VPS8Q8N3P4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.62□□□□□ -1.35
VPS8Q8N3P4 PHBP17-201ENST00000528576 541 ntBASIC6.62□□□□□ -1.35
VPS8Q8N3P4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VPS8Q8N3P4 MIR6867-201ENST00000610636 67 ntBASIC6.62□□□□□ -1.35
VPS8Q8N3P4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.62□□□□□ -1.35
VPS8Q8N3P4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VPS8Q8N3P4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.62□□□□□ -1.35
VPS8Q8N3P4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 RNU11-4P-201ENST00000391149 133 ntBASIC6.61□□□□□ -1.35
VPS8Q8N3P4 AMZ2P2-201ENST00000406819 1057 ntBASIC6.61□□□□□ -1.35
VPS8Q8N3P4 AC114755.5-201ENST00000447760 831 ntBASIC6.61□□□□□ -1.35
VPS8Q8N3P4 AC005008.1-201ENST00000456151 612 ntBASIC6.61□□□□□ -1.35
VPS8Q8N3P4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 RPS29P19-201ENST00000479709 171 ntBASIC6.61□□□□□ -1.35
VPS8Q8N3P4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms