Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 U6.48-201ENST00000618523 106 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 RPL23AP61-201ENST00000623642 466 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC112694.2-201ENST00000623697 768 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AP002967.1-201ENST00000624203 539 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC099786.3-201ENST00000565735 1410 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 RNU4-28P-201ENST00000364739 141 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 SNORD116-2-201ENST00000384274 95 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 SNORD116-6-201ENST00000384711 96 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 MIR513B-201ENST00000385136 84 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AL035079.1-201ENST00000405210 287 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 U3.32-201ENST00000408116 212 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC107081.1-201ENST00000414975 361 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 RPL22P18-201ENST00000417197 377 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 KRR1P1-201ENST00000419430 803 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 OR2X1P-201ENST00000421144 687 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC010099.3-201ENST00000423896 409 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 PNRC2P1-201ENST00000423940 420 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 RPL7AP61-201ENST00000443410 636 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC134050.1-201ENST00000495088 933 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 RPS4XP20-201ENST00000505751 772 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC105313.1-201ENST00000509121 353 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC093752.1-206ENST00000511823 336 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 OR7E128P-201ENST00000532736 1024 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 MTND3P13-201ENST00000574391 343 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC109309.2-201ENST00000612597 332 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AC026422.1-201ENST00000623961 452 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AL596275.2-204ENST00000641628 552 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 AL596275.2-206ENST00000641957 626 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 MTND4P8-201ENST00000514997 1362 ntBASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP4Q8N3C7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 AC235565.1-201ENST00000456962 1325 ntBASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP4Q8N3C7 RNU5B-1-201ENST00000363286 116 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms