Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC021646.1-201ENST00000605469 484 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC100812.1-201ENST00000607622 580 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AL355810.1-201ENST00000614629 552 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC104010.1-201ENST00000616889 150 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC233309.1-201ENST00000619522 751 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC067931.1-201ENST00000624190 671 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 NLRP3P1-201ENST00000622303 1785 ntBASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPAS3Q8IXF0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AP000473.2-201ENST00000602659 1537 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 NACAP2-201ENST00000318548 624 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 STAG3L4-201ENST00000352103 530 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 Y_RNA.159-201ENST00000363674 87 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 RNA5SP279-201ENST00000365513 117 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 U3.52-201ENST00000384034 216 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 RNU6-809P-201ENST00000384461 107 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AL590762.1-201ENST00000391782 432 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 MRPL42P3-201ENST00000401492 326 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AL359694.1-201ENST00000403247 604 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 HMGB3P31-201ENST00000413333 595 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 ATP5JP1-201ENST00000431631 322 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 CYCSP11-201ENST00000436426 315 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 RPS10P18-201ENST00000442662 495 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 GAPDHP23-201ENST00000444823 993 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 HIGD1AP16-201ENST00000450986 258 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC016724.1-201ENST00000453215 421 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 RPL26P30-201ENST00000453533 435 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC007967.1-201ENST00000455422 1159 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 RNU7-152P-201ENST00000458982 64 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 RPL7AP23-201ENST00000482625 776 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC113367.2-201ENST00000505749 160 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC110794.1-201ENST00000505816 425 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC112484.3-201ENST00000505910 329 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AL390198.2-201ENST00000510553 222 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 RNU6-1314P-201ENST00000517139 104 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 SUB1P2-201ENST00000556401 297 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC026826.3-201ENST00000561747 158 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 MIR3682-201ENST00000581338 84 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 BNIP3P16-201ENST00000589779 534 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 CYP2C61P-201ENST00000604072 290 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 MIR6861-201ENST00000618657 64 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 SNX18P10-201ENST00000625014 519 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AL034408.1-201ENST00000637712 664 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 CASC19-221ENST00000641309 1382 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 BX322650.1-201ENST00000332359 2143 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 AC025574.1-201ENST00000554784 1653 ntBASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
NPAS3Q8IXF0 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
NPAS3Q8IXF0 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.02□□□□□ -1.28
NPAS3Q8IXF0 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 RBPJP7-201ENST00000442803 1447 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 RBPJP5-201ENST00000449433 1447 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms