Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PPIAP9-201ENST00000403866 498 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AL512430.2-201ENST00000406786 339 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 RPS6P23-201ENST00000413224 722 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 RPL21P43-201ENST00000425440 472 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 MTND1P32-201ENST00000433043 938 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 THAP5P1-201ENST00000439089 262 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AL445567.1-201ENST00000439121 144 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 HMGB1P48-201ENST00000446155 598 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AL596266.1-201ENST00000448132 400 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 YRDCP3-201ENST00000456507 480 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC011979.1-201ENST00000472300 483 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 EIF3LP3-201ENST00000495197 822 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 SCARNA6.1-201ENST00000516989 238 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 IGLV3-24-201ENST00000517477 197 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC023632.1-201ENST00000518463 375 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC092709.1-201ENST00000521355 1045 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC006512.2-201ENST00000543250 486 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 HSPE1P2-201ENST00000554777 306 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 NIFKP8-201ENST00000560500 874 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC087465.1-201ENST00000560574 245 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC009852.2-201ENST00000567898 485 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC068790.7-201ENST00000602347 528 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 FAM27E4-201ENST00000605259 342 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC080013.3-201ENST00000606839 578 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC092140.2-201ENST00000618027 521 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC091932.2-201ENST00000623014 291 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC091305.2-201ENST00000624049 1576 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AC104623.2-202ENST00000623477 4002 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 RNU6-1339P-201ENST00000363574 91 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 RNU1-65P-201ENST00000363919 148 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 OR1L6-202ENST00000373684 1044 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 RNU2-50P-201ENST00000410494 143 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 MTND6P12-201ENST00000428247 522 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AL390023.1-201ENST00000428836 262 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 RPL7AP49-201ENST00000429522 581 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AL591438.1-201ENST00000433508 581 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 MTND5P2-201ENST00000442927 1142 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 TCEA1P3-201ENST00000443005 880 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 PTMAP3-201ENST00000447474 330 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms