Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 RN7SKP167-201ENST00000411047 285 ntBASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 RPS29P7-201ENST00000439662 171 ntBASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 RN7SL817P-201ENST00000480777 288 ntBASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 AC104164.2-201ENST00000496953 495 ntBASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 KCTD9P2-201ENST00000512203 1013 ntBASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCDC141Q6ZP82 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 RNU1-20P-201ENST00000363314 162 ntBASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 AC115285.1-201ENST00000424879 736 ntBASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 AC022034.3-201ENST00000471393 478 ntBASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 MIR4444-1-201ENST00000581696 74 ntBASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 MIR4444-2-201ENST00000584390 74 ntBASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 AC010608.2-201ENST00000624830 470 ntBASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC141Q6ZP82 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 SERPINA7P1-201ENST00000443077 631 ntBASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 RN7SL132P-201ENST00000478131 296 ntBASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 RPS4XP18-201ENST00000495480 763 ntBASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 AC146944.2-203ENST00000502493 354 ntBASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 AC139495.1-202ENST00000513164 354 ntBASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 AC091905.2-201ENST00000623143 306 ntBASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC141Q6ZP82 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 TRAV35-201ENST00000390462 330 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 OR2AH1P-201ENST00000425717 928 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AL451062.2-201ENST00000427515 271 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 ARAFP2-201ENST00000440565 559 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AL133372.1-201ENST00000493565 745 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AL352979.3-201ENST00000553515 247 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 MAPK10-372ENST00000641954 3413 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AC007998.4-201ENST00000612496 2533 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AC006971.1-201ENST00000407916 4486 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 RNA5SP44-201ENST00000410446 133 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AC108032.1-201ENST00000416706 207 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 RPL23AP81-201ENST00000455252 467 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 NPM1P21-201ENST00000513394 762 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 NDUFB4P12-201ENST00000513465 390 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AL356863.1-201ENST00000623378 1080 ntBASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC141Q6ZP82 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
CCDC141Q6ZP82 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC141Q6ZP82 AP001157.1-201ENST00000550837 2339 ntBASIC6.4□□□□□ -1.38
CCDC141Q6ZP82 AC003985.2-201ENST00000562268 1669 ntBASIC6.4□□□□□ -1.38
CCDC141Q6ZP82 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC141Q6ZP82 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC141Q6ZP82 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CCDC141Q6ZP82 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms