Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC004908.2-201ENST00000609090 574 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AP005137.2-201ENST00000609238 400 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 RMST_5.1-201ENST00000618704 126 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC069542.2-201ENST00000624816 216 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 AC024651.2-201ENST00000562480 2098 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RC3H1Q5TC82 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.93□□□□□ -1.14
RC3H1Q5TC82 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 COL6A4P1-202ENST00000487147 4317 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 Y_RNA.166-201ENST00000363730 102 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 MIR548P-201ENST00000408336 84 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC098592.2-201ENST00000413158 265 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AL713922.1-201ENST00000416477 747 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC245884.2-201ENST00000426257 404 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC091390.2-201ENST00000432573 374 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC002486.2-201ENST00000447806 590 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 Z82190.1-201ENST00000454534 490 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 NIFKP7-201ENST00000503365 834 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC104108.1-201ENST00000509930 412 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 SNORA18.6-201ENST00000516792 115 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AP001004.1-201ENST00000582468 324 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 OR7E18P-201ENST00000592589 702 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC020914.6-201ENST00000594327 272 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 SUGT1P3-202ENST00000604259 383 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC008250.2-201ENST00000615261 205 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 MIR1302-1-201ENST00000637932 143 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC110716.2-201ENST00000563865 3945 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC009237.3-203ENST00000442128 3551 ntBASIC7.92□□□□□ -1.14
RC3H1Q5TC82 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
RC3H1Q5TC82 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 Y_RNA.401-201ENST00000383965 117 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 RNU6-331P-201ENST00000384724 107 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AL391361.1-201ENST00000405580 489 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AL603908.1-201ENST00000406098 201 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 MIR1178-201ENST00000408396 91 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 RPL26P37-201ENST00000411983 438 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AC093084.1-201ENST00000424233 687 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 MTCO1P54-201ENST00000430139 712 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.91□□□□□ -1.14
RC3H1Q5TC82 RN7SL834P-201ENST00000461450 286 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 AC021660.1-201ENST00000465006 554 ntBASIC7.91□□□□□ -1.14
RC3H1Q5TC82 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms