Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.43□□□□□ -1.54
UBE3AQ05086 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UBE3AQ05086 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
UBE3AQ05086 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UBE3AQ05086 RNA5SP505-201ENST00000364748 108 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UBE3AQ05086 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.43□□□□□ -1.54
UBE3AQ05086 RNU6-1257P-201ENST00000384625 110 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
UBE3AQ05086 U3.28-201ENST00000391249 210 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 HMGB3P31-201ENST00000413333 595 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.43□□□□□ -1.54
UBE3AQ05086 TCEA1P4-201ENST00000415066 844 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 MTND2P15-201ENST00000418575 892 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.43□□□□□ -1.54
UBE3AQ05086 AC068287.1-201ENST00000430283 295 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 BX276092.6-201ENST00000430476 250 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.43□□□□□ -1.54
UBE3AQ05086 AL359265.2-201ENST00000434367 631 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.43□□□□□ -1.54
UBE3AQ05086 NPM1P39-201ENST00000449818 867 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.43□□□□□ -1.54
UBE3AQ05086 BX276092.8-201ENST00000455722 250 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 AC011005.3-201ENST00000491624 395 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UBE3AQ05086 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.43□□□□□ -1.54
UBE3AQ05086 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.43□□□□□ -1.54
UBE3AQ05086 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.43□□□□□ -1.54
UBE3AQ05086 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.43□□□□□ -1.54
UBE3AQ05086 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UBE3AQ05086 AP003066.2-201ENST00000529375 555 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
UBE3AQ05086 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.43□□□□□ -1.54
UBE3AQ05086 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.43□□□□□ -1.54
UBE3AQ05086 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.43□□□□□ -1.54
UBE3AQ05086 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
UBE3AQ05086 AC209154.1-201ENST00000582156 337 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 MIR5096-201ENST00000583713 70 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.43□□□□□ -1.54
UBE3AQ05086 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.43□□□□□ -1.54
UBE3AQ05086 AC010503.3-201ENST00000594355 540 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 ZNF92P3-201ENST00000596594 954 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 AC068790.4-201ENST00000602474 263 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 AL512782.1-201ENST00000603093 364 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 AC055764.2-201ENST00000610089 670 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 MIR7703-201ENST00000620784 77 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.43□□□□□ -1.54
UBE3AQ05086 AC138965.3-201ENST00000623875 498 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.43□□□□□ -1.54
UBE3AQ05086 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.43□□□□□ -1.54
UBE3AQ05086 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.43□□□□□ -1.54
UBE3AQ05086 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.43□□□□□ -1.54
UBE3AQ05086 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.43□□□□□ -1.54
UBE3AQ05086 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UBE3AQ05086 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UBE3AQ05086 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
UBE3AQ05086 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UBE3AQ05086 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
UBE3AQ05086 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
UBE3AQ05086 AL132640.2-201ENST00000559968 1698 ntBASIC5.43□□□□□ -1.54
UBE3AQ05086 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UBE3AQ05086 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
UBE3AQ05086 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
UBE3AQ05086 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.43□□□□□ -1.54
UBE3AQ05086 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.43□□□□□ -1.54
UBE3AQ05086 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
UBE3AQ05086 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UBE3AQ05086 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.42□□□□□ -1.54
UBE3AQ05086 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
UBE3AQ05086 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
UBE3AQ05086 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
UBE3AQ05086 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.42□□□□□ -1.54
UBE3AQ05086 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
UBE3AQ05086 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UBE3AQ05086 IGKV7-3-201ENST00000357453 298 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 RNA5SP27-201ENST00000363839 119 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
UBE3AQ05086 RPS3AP23-201ENST00000401762 784 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 HMGB3P18-201ENST00000406327 590 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 RN7SKP100-201ENST00000411258 284 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.42□□□□□ -1.54
UBE3AQ05086 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.42□□□□□ -1.54
UBE3AQ05086 MTND2P9-201ENST00000422293 931 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.42□□□□□ -1.54
UBE3AQ05086 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.42□□□□□ -1.54
UBE3AQ05086 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.42□□□□□ -1.54
UBE3AQ05086 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.42□□□□□ -1.54
UBE3AQ05086 AC016712.1-201ENST00000431088 378 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.42□□□□□ -1.54
UBE3AQ05086 FHP1-201ENST00000442741 703 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.42□□□□□ -1.54
UBE3AQ05086 AC044797.1-201ENST00000445744 679 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 AL096803.2-201ENST00000450032 677 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 AC243772.1-201ENST00000451620 410 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.42□□□□□ -1.54
UBE3AQ05086 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.42□□□□□ -1.54
UBE3AQ05086 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.42□□□□□ -1.54
UBE3AQ05086 RPL21P18-201ENST00000469899 480 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 RPL7AP10-201ENST00000481016 791 ntBASIC5.42□□□□□ -1.54
UBE3AQ05086 RPL23AP72-201ENST00000492447 435 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms