Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.02□□□□□ -1.93
PRKDCP78527 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.02□□□□□ -1.93
PRKDCP78527 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 AC021242.1-201ENST00000507315 2035 ntBASIC3.02□□□□□ -1.93
PRKDCP78527 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 NAP1L4P1-201ENST00000319092 1157 ntBASIC3.02□□□□□ -1.93
PRKDCP78527 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.02□□□□□ -1.93
PRKDCP78527 AC138761.5-201ENST00000433967 325 ntBASIC3.02□□□□□ -1.93
PRKDCP78527 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.02□□□□□ -1.93
PRKDCP78527 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.02□□□□□ -1.93
PRKDCP78527 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC3.02□□□□□ -1.93
PRKDCP78527 AP005435.3-201ENST00000531260 3198 ntBASIC3.02□□□□□ -1.93
PRKDCP78527 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.02□□□□□ -1.93
PRKDCP78527 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
PRKDCP78527 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PRKDCP78527 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.02□□□□□ -1.93
PRKDCP78527 AC112206.1-201ENST00000468416 477 ntBASIC3.02□□□□□ -1.93
PRKDCP78527 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.02□□□□□ -1.93
PRKDCP78527 HIGD1AP18-201ENST00000520730 278 ntBASIC3.02□□□□□ -1.93
PRKDCP78527 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.02□□□□□ -1.93
PRKDCP78527 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.02□□□□□ -1.93
PRKDCP78527 AL031666.3-201ENST00000609320 1006 ntBASIC3.02□□□□□ -1.93
PRKDCP78527 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PRKDCP78527 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKDCP78527 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PRKDCP78527 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
PRKDCP78527 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
PRKDCP78527 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.01□□□□□ -1.93
PRKDCP78527 AC104333.2-201ENST00000422630 192 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.01□□□□□ -1.93
PRKDCP78527 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.01□□□□□ -1.93
PRKDCP78527 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.01□□□□□ -1.93
PRKDCP78527 Z98200.1-201ENST00000607298 470 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 AL645927.2-201ENST00000618350 349 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 JPX-212ENST00000639185 9658 ntTSL 5 BASIC3.01□□□□□ -1.93
PRKDCP78527 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC3.01□□□□□ -1.93
PRKDCP78527 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC3.01□□□□□ -1.93
PRKDCP78527 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PRKDCP78527 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC3.01□□□□□ -1.93
PRKDCP78527 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.01□□□□□ -1.93
PRKDCP78527 AL591503.2-201ENST00000442314 1005 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.01□□□□□ -1.93
PRKDCP78527 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.01□□□□□ -1.93
PRKDCP78527 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.01□□□□□ -1.93
PRKDCP78527 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC3.01□□□□□ -1.93
PRKDCP78527 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.01□□□□□ -1.93
PRKDCP78527 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.01□□□□□ -1.93
PRKDCP78527 BMPR1APS1-201ENST00000403332 1598 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PRKDCP78527 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.01□□□□□ -1.93
PRKDCP78527 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.01□□□□□ -1.93
PRKDCP78527 SNORD3H-201ENST00000384486 214 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 ATP5A1P2-201ENST00000412323 255 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.01□□□□□ -1.93
PRKDCP78527 TEX41-206ENST00000432608 661 ntTSL 3 BASIC3.01□□□□□ -1.93
PRKDCP78527 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.01□□□□□ -1.93
PRKDCP78527 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 AC010374.1-201ENST00000503762 1237 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 ATP1B1P1-201ENST00000509767 915 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 Vault.1-201ENST00000516474 102 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 RPL23AP53-201ENST00000521854 457 ntBASIC3.01□□□□□ -1.93
PRKDCP78527 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.01□□□□□ -1.93
PRKDCP78527 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.01□□□□□ -1.93
PRKDCP78527 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKDCP78527 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PRKDCP78527 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms