Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MTCO1P30-201ENST00000515244 580 ntBASIC5.24□□□□□ -1.57
NKX6-1P78426 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX6-1P78426 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX6-1P78426 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX6-1P78426 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX6-1P78426 AC084824.1-201ENST00000550917 1005 ntBASIC5.24□□□□□ -1.57
NKX6-1P78426 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX6-1P78426 AC093519.1-201ENST00000566109 298 ntBASIC5.24□□□□□ -1.57
NKX6-1P78426 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX6-1P78426 AP005119.1-201ENST00000580956 292 ntBASIC5.24□□□□□ -1.57
NKX6-1P78426 AC010487.1-201ENST00000594408 1172 ntBASIC5.24□□□□□ -1.57
NKX6-1P78426 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX6-1P78426 MIR6719-201ENST00000622428 87 ntBASIC5.24□□□□□ -1.57
NKX6-1P78426 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX6-1P78426 AL357562.1-201ENST00000624911 609 ntBASIC5.24□□□□□ -1.57
NKX6-1P78426 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX6-1P78426 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX6-1P78426 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX6-1P78426 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX6-1P78426 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX6-1P78426 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX6-1P78426 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX6-1P78426 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX6-1P78426 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
NKX6-1P78426 AC011447.7-201ENST00000624228 1590 ntBASIC5.24□□□□□ -1.57
NKX6-1P78426 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX6-1P78426 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX6-1P78426 AC010329.2-201ENST00000595195 2737 ntBASIC5.24□□□□□ -1.57
NKX6-1P78426 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX6-1P78426 AC107982.1-201ENST00000507171 1300 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 AC021755.1-201ENST00000559747 1447 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX6-1P78426 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 USP9YP4-201ENST00000424401 1745 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 AC087359.1-201ENST00000508335 1740 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AP005435.3-201ENST00000531260 3198 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
NKX6-1P78426 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX6-1P78426 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 RNU6-553P-201ENST00000364047 96 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 RNU6-621P-201ENST00000364752 109 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 SUGT1P1-201ENST00000379514 476 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 RNU6-253P-201ENST00000384730 105 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 MIR937-201ENST00000401271 86 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX6-1P78426 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX6-1P78426 VN1R110P-201ENST00000438988 971 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX6-1P78426 EEF1B2P5-201ENST00000444820 548 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 MTND2P4-201ENST00000445034 1004 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AC016027.4-201ENST00000450866 277 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 NDUFA5P7-201ENST00000452914 242 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 SBDSP1-204ENST00000453858 737 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AC006511.1-201ENST00000470614 315 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX6-1P78426 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX6-1P78426 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX6-1P78426 RNA5SP362-201ENST00000516048 118 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 RNU6-759P-201ENST00000516740 103 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 MTCO1P49-201ENST00000523429 802 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX6-1P78426 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX6-1P78426 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX6-1P78426 SERPINE4P-201ENST00000554978 281 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX6-1P78426 COX6CP7-201ENST00000597056 208 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 AC103881.1-201ENST00000603476 538 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 AL590229.1-201ENST00000603497 542 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.23□□□□□ -1.57
NKX6-1P78426 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
NKX6-1P78426 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 AP005431.1-201ENST00000618479 319 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 AL607023.1-201ENST00000620045 248 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX6-1P78426 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX6-1P78426 MKKS-204ENST00000639674 192 ntBASIC5.23□□□□□ -1.57
NKX6-1P78426 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX6-1P78426 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
NKX6-1P78426 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
NKX6-1P78426 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX6-1P78426 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms