Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
RPL39P62891 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RPL39P62891 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC2.95□□□□□ -1.94
RPL39P62891 AC090220.1-201ENST00000593078 1699 ntBASIC2.95□□□□□ -1.94
RPL39P62891 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RPL39P62891 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC2.95□□□□□ -1.94
RPL39P62891 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.95□□□□□ -1.94
RPL39P62891 AC008033.1-201ENST00000216407 1162 ntBASIC2.95□□□□□ -1.94
RPL39P62891 OR10J6P-201ENST00000289731 930 ntBASIC2.95□□□□□ -1.94
RPL39P62891 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RPL39P62891 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC2.95□□□□□ -1.94
RPL39P62891 AL583835.1-201ENST00000399570 407 ntBASIC2.95□□□□□ -1.94
RPL39P62891 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
RPL39P62891 RN7SKP206-201ENST00000410823 293 ntBASIC2.95□□□□□ -1.94
RPL39P62891 RN7SKP106-201ENST00000410832 272 ntBASIC2.95□□□□□ -1.94
RPL39P62891 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RPL39P62891 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC2.95□□□□□ -1.94
RPL39P62891 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC2.95□□□□□ -1.94
RPL39P62891 AC234779.1-201ENST00000425910 285 ntBASIC2.95□□□□□ -1.94
RPL39P62891 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RPL39P62891 AL132765.1-201ENST00000434165 553 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC2.95□□□□□ -1.94
RPL39P62891 AF228730.2-201ENST00000438784 848 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC2.95□□□□□ -1.94
RPL39P62891 AL356535.1-201ENST00000440335 398 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.95□□□□□ -1.94
RPL39P62891 EIF4EBP2P1-201ENST00000450009 343 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AC053481.1-201ENST00000467217 306 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AC096741.1-201ENST00000472250 846 ntBASIC2.95□□□□□ -1.94
RPL39P62891 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
RPL39P62891 RPS29P19-201ENST00000479709 171 ntBASIC2.95□□□□□ -1.94
RPL39P62891 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.95□□□□□ -1.94
RPL39P62891 RN7SL808P-201ENST00000496066 299 ntBASIC2.95□□□□□ -1.94
RPL39P62891 BNIP3P41-201ENST00000503774 571 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC2.95□□□□□ -1.94
RPL39P62891 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC2.95□□□□□ -1.94
RPL39P62891 AC106872.4-201ENST00000510050 523 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AC147055.3-201ENST00000510547 851 ntBASIC2.95□□□□□ -1.94
RPL39P62891 TRAPPC2P2-201ENST00000517589 409 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RPL39P62891 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RPL39P62891 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC2.95□□□□□ -1.94
RPL39P62891 AC090888.3-201ENST00000558917 509 ntBASIC2.95□□□□□ -1.94
RPL39P62891 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC2.95□□□□□ -1.94
RPL39P62891 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.95□□□□□ -1.94
RPL39P62891 AC012146.2-201ENST00000576545 416 ntBASIC2.95□□□□□ -1.94
RPL39P62891 MIR3176-201ENST00000582210 90 ntBASIC2.95□□□□□ -1.94
RPL39P62891 HMGB1P50-201ENST00000605814 607 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC2.95□□□□□ -1.94
RPL39P62891 AC008013.2-202ENST00000637965 364 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RPL39P62891 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
RPL39P62891 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC2.95□□□□□ -1.94
RPL39P62891 MARK2P15-201ENST00000432204 2186 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AC027287.1-201ENST00000553115 1453 ntBASIC2.95□□□□□ -1.94
RPL39P62891 AC132825.1-201ENST00000463573 2247 ntBASIC2.95□□□□□ -1.94
RPL39P62891 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 MFSD8-242ENST00000641690 4199 ntBASIC2.94□□□□□ -1.94
RPL39P62891 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RPL39P62891 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC2.94□□□□□ -1.94
RPL39P62891 BMS1P3-201ENST00000372011 932 ntBASIC2.94□□□□□ -1.94
RPL39P62891 RNU1-89P-201ENST00000384592 164 ntBASIC2.94□□□□□ -1.94
RPL39P62891 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RPL39P62891 RN7SKP56-201ENST00000410513 331 ntBASIC2.94□□□□□ -1.94
RPL39P62891 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 RPL7AP25-201ENST00000423357 805 ntBASIC2.94□□□□□ -1.94
RPL39P62891 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 AC002069.1-201ENST00000429649 1159 ntBASIC2.94□□□□□ -1.94
RPL39P62891 MTCO1P54-201ENST00000430139 712 ntBASIC2.94□□□□□ -1.94
RPL39P62891 AC011742.1-201ENST00000431448 434 ntBASIC2.94□□□□□ -1.94
RPL39P62891 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 VN1R25P-201ENST00000443385 738 ntBASIC2.94□□□□□ -1.94
RPL39P62891 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC2.94□□□□□ -1.94
RPL39P62891 CEACAMP7-201ENST00000444105 496 ntBASIC2.94□□□□□ -1.94
RPL39P62891 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC2.94□□□□□ -1.94
RPL39P62891 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC2.94□□□□□ -1.94
RPL39P62891 AC091685.2-201ENST00000454924 864 ntBASIC2.94□□□□□ -1.94
RPL39P62891 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 VN1R40P-201ENST00000455196 941 ntBASIC2.94□□□□□ -1.94
RPL39P62891 DHFRP3-201ENST00000455595 559 ntBASIC2.94□□□□□ -1.94
RPL39P62891 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC2.94□□□□□ -1.94
RPL39P62891 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC2.94□□□□□ -1.94
RPL39P62891 RN7SL727P-201ENST00000482164 296 ntBASIC2.94□□□□□ -1.94
RPL39P62891 RN7SL205P-201ENST00000490174 284 ntBASIC2.94□□□□□ -1.94
RPL39P62891 RPL31P61-201ENST00000496160 376 ntBASIC2.94□□□□□ -1.94
RPL39P62891 HPRT1P2-201ENST00000505250 544 ntBASIC2.94□□□□□ -1.94
RPL39P62891 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC2.94□□□□□ -1.94
RPL39P62891 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC2.94□□□□□ -1.94
RPL39P62891 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 AP006289.1-201ENST00000538089 277 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms