Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CKS1BP61024 RNA5SP345-201ENST00000410646 108 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 RHEBP3-201ENST00000411920 351 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 RPS12P23-201ENST00000419579 400 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 EIF4HP2-201ENST00000424380 563 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 CKS1BP6-201ENST00000424932 240 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.3□□□□□ -1.88
CKS1BP61024 MAPRE1P3-201ENST00000435438 796 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 AC004938.1-201ENST00000438468 308 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 RPS29P9-201ENST00000440360 171 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 RPL7AP61-201ENST00000443410 636 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.3□□□□□ -1.88
CKS1BP61024 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 RNU6-1218P-201ENST00000458990 108 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.3□□□□□ -1.88
CKS1BP61024 RPL23AP62-201ENST00000463396 453 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 AP000873.1-201ENST00000463987 400 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 NDUFA5P5-201ENST00000468361 342 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.3□□□□□ -1.88
CKS1BP61024 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 AC011037.1-201ENST00000483964 558 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 PFN1P8-201ENST00000497012 543 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 AC022826.1-201ENST00000519383 805 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.3□□□□□ -1.88
CKS1BP61024 IGLV3-26-201ENST00000520756 302 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 NPM1P35-201ENST00000533043 868 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.3□□□□□ -1.88
CKS1BP61024 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 AL161713.1-201ENST00000555538 145 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.3□□□□□ -1.88
CKS1BP61024 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.3□□□□□ -1.88
CKS1BP61024 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.3□□□□□ -1.88
CKS1BP61024 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC3.3□□□□□ -1.88
CKS1BP61024 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.3□□□□□ -1.88
CKS1BP61024 SNORA74C-1-201ENST00000580726 201 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.3□□□□□ -1.88
CKS1BP61024 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 AC010857.1-201ENST00000606398 594 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 MIR6837-201ENST00000620884 64 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 AL049536.1-201ENST00000625043 744 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CKS1BP61024 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.3□□□□□ -1.88
CKS1BP61024 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 AL353746.1-201ENST00000566293 6881 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CKS1BP61024 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CKS1BP61024 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CKS1BP61024 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.29□□□□□ -1.88
CKS1BP61024 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CKS1BP61024 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CKS1BP61024 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
CKS1BP61024 TMSB4XP4-201ENST00000323496 618 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CKS1BP61024 RN7SKP103-201ENST00000363848 320 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CKS1BP61024 SNORA77-201ENST00000408716 125 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 RN7SKP114-201ENST00000410327 279 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 RNA5SP178-201ENST00000410380 128 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 GABARAPL3-201ENST00000412799 354 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.29□□□□□ -1.88
CKS1BP61024 JKAMPP1-201ENST00000413804 919 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.29□□□□□ -1.88
CKS1BP61024 RPL23AP19-201ENST00000436229 369 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CKS1BP61024 AL450023.3-201ENST00000440592 271 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 AL137845.2-201ENST00000444292 988 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.29□□□□□ -1.88
CKS1BP61024 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.29□□□□□ -1.88
CKS1BP61024 HMGN1P2-201ENST00000445197 310 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.29□□□□□ -1.88
CKS1BP61024 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.29□□□□□ -1.88
CKS1BP61024 TVP23BP2-201ENST00000455082 615 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 YRDCP3-201ENST00000456507 480 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 AC084754.1-201ENST00000463466 464 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 AC010683.1-201ENST00000473673 378 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 TRBV8-1-201ENST00000481590 279 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.29□□□□□ -1.88
CKS1BP61024 AC015864.1-201ENST00000496512 544 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 SNX5P1-201ENST00000505757 1041 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC3.29□□□□□ -1.88
CKS1BP61024 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.29□□□□□ -1.88
CKS1BP61024 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.29□□□□□ -1.88
CKS1BP61024 AC006499.6-201ENST00000511169 607 ntBASIC3.29□□□□□ -1.88
CKS1BP61024 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.29□□□□□ -1.88
CKS1BP61024 RNA5SP473-201ENST00000516402 125 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms