Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RNA5SP362-201ENST00000516048 118 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 SMARCE1P4-201ENST00000523647 241 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.83□□□□□ -1.8
SPCS3P61009 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.83□□□□□ -1.8
SPCS3P61009 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SPCS3P61009 OR11J2P-201ENST00000555298 907 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 AC234775.3-201ENST00000564612 656 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.83□□□□□ -1.8
SPCS3P61009 AL512329.2-201ENST00000607350 548 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 AL022401.1-201ENST00000619498 108 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 AC008115.4-201ENST00000619780 775 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.83□□□□□ -1.8
SPCS3P61009 AL359757.1-201ENST00000623176 255 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 CR381572.2-201ENST00000624852 397 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SPCS3P61009 MTND4P10-201ENST00000446199 1363 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.83□□□□□ -1.8
SPCS3P61009 AP001002.1-201ENST00000625148 1513 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SPCS3P61009 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SPCS3P61009 AC090229.1-201ENST00000590983 1609 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 AC007342.7-201ENST00000624610 2337 ntBASIC3.83□□□□□ -1.8
SPCS3P61009 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SPCS3P61009 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SPCS3P61009 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SPCS3P61009 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SPCS3P61009 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SPCS3P61009 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SPCS3P61009 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SPCS3P61009 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SPCS3P61009 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SPCS3P61009 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.82□□□□□ -1.8
SPCS3P61009 ZFRP1-201ENST00000457579 2970 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SPCS3P61009 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.82□□□□□ -1.8
SPCS3P61009 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SPCS3P61009 HSPD1P14-201ENST00000432666 1618 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SPCS3P61009 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.82□□□□□ -1.8
SPCS3P61009 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SPCS3P61009 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.82□□□□□ -1.8
SPCS3P61009 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SPCS3P61009 RN7SKP160-201ENST00000363804 340 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 RNA5SP242-201ENST00000364171 118 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 RNA5SP455-201ENST00000365190 119 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.82□□□□□ -1.8
SPCS3P61009 U3.36-201ENST00000408418 213 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 RNU4-34P-201ENST00000410431 124 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 NPM1P4-201ENST00000414095 812 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.82□□□□□ -1.8
SPCS3P61009 AL159169.1-201ENST00000421119 127 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 NDUFA5P1-201ENST00000433858 341 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 AC245047.2-201ENST00000441060 530 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 AL163193.1-201ENST00000444895 788 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.82□□□□□ -1.8
SPCS3P61009 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SPCS3P61009 AC111000.5-201ENST00000506559 1178 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.82□□□□□ -1.8
SPCS3P61009 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.82□□□□□ -1.8
SPCS3P61009 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.82□□□□□ -1.8
SPCS3P61009 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.82□□□□□ -1.8
SPCS3P61009 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SPCS3P61009 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.82□□□□□ -1.8
SPCS3P61009 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SPCS3P61009 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.82□□□□□ -1.8
SPCS3P61009 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.82□□□□□ -1.8
SPCS3P61009 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.82□□□□□ -1.8
SPCS3P61009 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.82□□□□□ -1.8
SPCS3P61009 MIR4716-201ENST00000579628 84 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.82□□□□□ -1.8
SPCS3P61009 SLC25A36P1-201ENST00000590111 465 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 AL627230.1-201ENST00000613077 211 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 AL591926.8-201ENST00000616876 211 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 AL356274.1-201ENST00000617064 410 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.82□□□□□ -1.8
SPCS3P61009 CFTRP2-201ENST00000634304 199 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.82□□□□□ -1.8
SPCS3P61009 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SPCS3P61009 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SPCS3P61009 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SPCS3P61009 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SPCS3P61009 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.82□□□□□ -1.8
SPCS3P61009 AC099654.2-201ENST00000433031 1980 ntBASIC3.82□□□□□ -1.8
SPCS3P61009 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SPCS3P61009 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SPCS3P61009 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.81□□□□□ -1.8
SPCS3P61009 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.81□□□□□ -1.8
SPCS3P61009 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SPCS3P61009 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
SPCS3P61009 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SPCS3P61009 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.81□□□□□ -1.8
SPCS3P61009 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SPCS3P61009 RNA5SP428-201ENST00000365129 132 ntBASIC3.81□□□□□ -1.8
SPCS3P61009 SNORD6-201ENST00000365444 73 ntBASIC3.81□□□□□ -1.8
SPCS3P61009 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SPCS3P61009 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.81□□□□□ -1.8
SPCS3P61009 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.81□□□□□ -1.8
SPCS3P61009 GTF2IP5-201ENST00000414608 731 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms