Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PABPC1P8-201ENST00000452851 2086 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GFRA1P56159 Y_RNA.97-201ENST00000363094 102 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 RNA5SP333-201ENST00000363466 118 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 RNA5SP334-201ENST00000364825 118 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.67□□□□□ -1.5
GFRA1P56159 RNU6-657P-201ENST00000383904 107 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GFRA1P56159 RNU1-149P-201ENST00000390870 161 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 SNRPEP2-201ENST00000397592 279 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 GCNT1P4-201ENST00000404096 329 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 VN1R8P-201ENST00000407739 893 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.67□□□□□ -1.5
GFRA1P56159 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.67□□□□□ -1.5
GFRA1P56159 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 GLRXP1-201ENST00000423261 334 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 USP9YP18-201ENST00000425912 695 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 IPMKP1-201ENST00000425988 855 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AL356583.2-201ENST00000426536 280 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AL354707.3-201ENST00000427308 331 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 DPPA2P1-201ENST00000428060 556 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 IGLV3-4-201ENST00000432300 244 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
GFRA1P56159 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 SNRPEP7-201ENST00000438350 220 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AL022238.1-201ENST00000442557 355 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 USP9YP12-201ENST00000450481 570 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 RPL31P58-201ENST00000469001 379 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.67□□□□□ -1.5
GFRA1P56159 RPS3AP17-201ENST00000472594 777 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AP002453.1-201ENST00000492327 668 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 RPL9P6-201ENST00000492764 598 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AC093809.1-201ENST00000509155 340 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 PGBD4P4-201ENST00000509673 613 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AC006499.2-201ENST00000513470 337 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AC022483.1-201ENST00000514020 567 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 MAST4-IT1-201ENST00000514241 658 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AC011853.1-201ENST00000518911 454 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.67□□□□□ -1.5
GFRA1P56159 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 AC006512.2-201ENST00000543250 486 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.67□□□□□ -1.5
GFRA1P56159 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.67□□□□□ -1.5
GFRA1P56159 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 HMGN2P47-201ENST00000559378 272 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 SNORA59B-202ENST00000578183 701 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.67□□□□□ -1.5
GFRA1P56159 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 BNIP3P11-201ENST00000603878 563 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA1P56159 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.67□□□□□ -1.5
GFRA1P56159 AP001052.1-201ENST00000626421 99 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.67□□□□□ -1.5
GFRA1P56159 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
GFRA1P56159 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.67□□□□□ -1.5
GFRA1P56159 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
GFRA1P56159 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
GFRA1P56159 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 SMG1P7-201ENST00000565246 2704 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
GFRA1P56159 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 AL133243.2-201ENST00000610331 1621 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 AC110373.1-201ENST00000505994 3505 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 CAP1P2-201ENST00000417455 1409 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 GUCY1B2-204ENST00000531898 1979 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 RNA5SP478-201ENST00000364657 115 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms