Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.14□□□□□ -1.59
VCPP55072 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.14□□□□□ -1.59
VCPP55072 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VCPP55072 AC099654.2-201ENST00000433031 1980 ntBASIC5.14□□□□□ -1.59
VCPP55072 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.14□□□□□ -1.59
VCPP55072 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VCPP55072 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VCPP55072 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
VCPP55072 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.14□□□□□ -1.59
VCPP55072 MAPK10-349ENST00000641767 3661 ntBASIC5.13□□□□□ -1.59
VCPP55072 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VCPP55072 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.13□□□□□ -1.59
VCPP55072 VPS35P1-201ENST00000563400 1518 ntBASIC5.13□□□□□ -1.59
VCPP55072 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.13□□□□□ -1.59
VCPP55072 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VCPP55072 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
VCPP55072 AL590240.1-201ENST00000334118 313 ntBASIC5.13□□□□□ -1.59
VCPP55072 RNA5SP28-201ENST00000363841 119 ntBASIC5.13□□□□□ -1.59
VCPP55072 SNORA70F-201ENST00000384142 135 ntBASIC5.13□□□□□ -1.59
VCPP55072 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.13□□□□□ -1.59
VCPP55072 MIR1271-201ENST00000408537 86 ntBASIC5.13□□□□□ -1.59
VCPP55072 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.13□□□□□ -1.59
VCPP55072 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VCPP55072 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.13□□□□□ -1.59
VCPP55072 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.13□□□□□ -1.59
VCPP55072 RPS27AP12-201ENST00000429552 465 ntBASIC5.13□□□□□ -1.59
VCPP55072 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VCPP55072 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.13□□□□□ -1.59
VCPP55072 AC005154.2-201ENST00000438110 379 ntBASIC5.13□□□□□ -1.59
VCPP55072 AP000936.3-201ENST00000438127 255 ntBASIC5.13□□□□□ -1.59
VCPP55072 SCAND3P1-201ENST00000439854 1060 ntBASIC5.13□□□□□ -1.59
VCPP55072 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.13□□□□□ -1.59
VCPP55072 FCF1P7-201ENST00000451185 558 ntBASIC5.13□□□□□ -1.59
VCPP55072 RPL7P32-201ENST00000457119 744 ntBASIC5.13□□□□□ -1.59
VCPP55072 RN7SL517P-201ENST00000462240 305 ntBASIC5.13□□□□□ -1.59
VCPP55072 AC090686.1-201ENST00000481577 749 ntBASIC5.13□□□□□ -1.59
VCPP55072 CCNHP1-201ENST00000513311 678 ntBASIC5.13□□□□□ -1.59
VCPP55072 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.13□□□□□ -1.59
VCPP55072 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.13□□□□□ -1.59
VCPP55072 AC022784.5-201ENST00000522241 437 ntBASIC5.13□□□□□ -1.59
VCPP55072 CYCSP29-201ENST00000533731 318 ntBASIC5.13□□□□□ -1.59
VCPP55072 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.13□□□□□ -1.59
VCPP55072 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.13□□□□□ -1.59
VCPP55072 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.13□□□□□ -1.59
VCPP55072 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.13□□□□□ -1.59
VCPP55072 AC093227.2-201ENST00000589357 285 ntBASIC5.13□□□□□ -1.59
VCPP55072 AC020910.3-201ENST00000603701 874 ntBASIC5.13□□□□□ -1.59
VCPP55072 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.13□□□□□ -1.59
VCPP55072 MIR6853-201ENST00000619642 74 ntBASIC5.13□□□□□ -1.59
VCPP55072 AC107027.3-201ENST00000565095 3473 ntBASIC5.13□□□□□ -1.59
VCPP55072 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VCPP55072 LINC01355-201ENST00000566551 5444 ntBASIC5.13□□□□□ -1.59
VCPP55072 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VCPP55072 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VCPP55072 AC009643.2-201ENST00000603543 1448 ntBASIC5.13□□□□□ -1.59
VCPP55072 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VCPP55072 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VCPP55072 NEAT1-202ENST00000501122 22743 ntBASIC5.13□□□□□ -1.59
VCPP55072 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.13□□□□□ -1.59
VCPP55072 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VCPP55072 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VCPP55072 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.13□□□□□ -1.59
VCPP55072 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VCPP55072 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VCPP55072 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VCPP55072 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VCPP55072 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.12□□□□□ -1.59
VCPP55072 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VCPP55072 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.12□□□□□ -1.59
VCPP55072 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VCPP55072 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VCPP55072 AL049697.2-201ENST00000403708 294 ntBASIC5.12□□□□□ -1.59
VCPP55072 BX510359.2-201ENST00000417920 305 ntBASIC5.12□□□□□ -1.59
VCPP55072 CKS1BP6-201ENST00000424932 240 ntBASIC5.12□□□□□ -1.59
VCPP55072 Z95327.1-201ENST00000446082 482 ntBASIC5.12□□□□□ -1.59
VCPP55072 AC020890.1-201ENST00000491837 504 ntBASIC5.12□□□□□ -1.59
VCPP55072 AC025674.1-201ENST00000507074 324 ntBASIC5.12□□□□□ -1.59
VCPP55072 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VCPP55072 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.12□□□□□ -1.59
VCPP55072 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.12□□□□□ -1.59
VCPP55072 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.12□□□□□ -1.59
VCPP55072 AC023813.4-201ENST00000607580 580 ntBASIC5.12□□□□□ -1.59
VCPP55072 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VCPP55072 AC022106.2-201ENST00000620114 757 ntBASIC5.12□□□□□ -1.59
VCPP55072 AC015871.5-202ENST00000623252 701 ntBASIC5.12□□□□□ -1.59
VCPP55072 AC067931.1-201ENST00000624190 671 ntBASIC5.12□□□□□ -1.59
VCPP55072 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
VCPP55072 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VCPP55072 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.12□□□□□ -1.59
VCPP55072 ECM1P2-201ENST00000503354 1577 ntBASIC5.12□□□□□ -1.59
VCPP55072 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VCPP55072 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.11□□□□□ -1.59
VCPP55072 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
VCPP55072 RNU6-697P-201ENST00000363348 107 ntBASIC5.11□□□□□ -1.59
VCPP55072 RNA5SP105-201ENST00000391123 113 ntBASIC5.11□□□□□ -1.59
VCPP55072 AL136116.2-201ENST00000404020 785 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms