Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.12□□□□□ -1.11
NUBP1P53384 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 SMIM11P1-201ENST00000369586 178 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 RNU6-729P-201ENST00000384399 107 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 RNU6-1154P-201ENST00000391001 104 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC8.12□□□□□ -1.11
NUBP1P53384 PPIL1P1-201ENST00000423936 499 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 AL589794.1-201ENST00000424971 390 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 HMGB3P24-201ENST00000433260 622 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.12□□□□□ -1.11
NUBP1P53384 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
NUBP1P53384 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC8.12□□□□□ -1.11
NUBP1P53384 AL031659.1-201ENST00000447075 539 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 RPL23AP80-201ENST00000495605 424 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 AC104576.1-201ENST00000524225 88 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC8.12□□□□□ -1.11
NUBP1P53384 AC007068.2-201ENST00000543168 395 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC8.12□□□□□ -1.11
NUBP1P53384 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.12□□□□□ -1.11
NUBP1P53384 MIR4310-201ENST00000582950 57 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 AL160281.1-201ENST00000605307 311 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC8.12□□□□□ -1.11
NUBP1P53384 AC040978.1-201ENST00000617244 1282 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 AC073488.3-201ENST00000631611 778 ntBASIC8.12□□□□□ -1.11
NUBP1P53384 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
NUBP1P53384 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 CD200-201ENST00000315711 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC8.12□□□□□ -1.11
NUBP1P53384 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 B4GALT6-202ENST00000306851 3891 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC8.12□□□□□ -1.11
NUBP1P53384 SEZ6-204ENST00000442608 3805 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
NUBP1P53384 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NUBP1P53384 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.11□□□□□ -1.11
NUBP1P53384 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC8.11□□□□□ -1.11
NUBP1P53384 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
NUBP1P53384 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC8.11□□□□□ -1.11
NUBP1P53384 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.11□□□□□ -1.11
NUBP1P53384 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC8.11□□□□□ -1.11
NUBP1P53384 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 AL512353.3-201ENST00000417517 1326 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 RNU6-1020P-201ENST00000363684 107 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
NUBP1P53384 RNU6-417P-201ENST00000384712 107 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 RPS29P13-201ENST00000402041 169 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC8.11□□□□□ -1.11
NUBP1P53384 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC8.11□□□□□ -1.11
NUBP1P53384 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC8.11□□□□□ -1.11
NUBP1P53384 RPS6P12-201ENST00000432491 726 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 AC008264.1-201ENST00000447612 367 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.11□□□□□ -1.11
NUBP1P53384 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.11□□□□□ -1.11
NUBP1P53384 RPL21P104-201ENST00000464143 478 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC8.11□□□□□ -1.11
NUBP1P53384 RN7SL267P-201ENST00000485107 261 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 RPS17P5-201ENST00000498293 408 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 OR51K1P-201ENST00000510214 950 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 AL359273.1-201ENST00000510918 627 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC8.11□□□□□ -1.11
NUBP1P53384 WBP1LP3-201ENST00000523033 208 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 AC130366.1-201ENST00000526505 1192 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC8.11□□□□□ -1.11
NUBP1P53384 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.11□□□□□ -1.11
NUBP1P53384 SULT1C2P2-201ENST00000562517 294 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC8.11□□□□□ -1.11
NUBP1P53384 AC174048.1-201ENST00000603389 144 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 AC007998.5-201ENST00000622938 237 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 AC012629.3-201ENST00000623397 328 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 AC006453.3-201ENST00000635891 377 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC8.11□□□□□ -1.11
NUBP1P53384 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC8.11□□□□□ -1.11
NUBP1P53384 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.11□□□□□ -1.11
NUBP1P53384 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.11□□□□□ -1.11
NUBP1P53384 AC009643.2-201ENST00000603543 1448 ntBASIC8.11□□□□□ -1.11
NUBP1P53384 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC8.11□□□□□ -1.11
NUBP1P53384 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
NUBP1P53384 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
NUBP1P53384 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC8.1□□□□□ -1.11
NUBP1P53384 AC116667.1-201ENST00000604855 2072 ntBASIC8.1□□□□□ -1.11
NUBP1P53384 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms