Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
BRCA2P51587 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRCA2P51587 MTCO1P12-201ENST00000414273 1543 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
BRCA2P51587 AC140134.1-201ENST00000511830 3544 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRCA2P51587 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRCA2P51587 AC007066.1-201ENST00000392902 381 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 AL358472.1-201ENST00000431295 329 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.57□□□□□ -1.68
BRCA2P51587 UBDP1-202ENST00000457888 382 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
BRCA2P51587 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRCA2P51587 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRCA2P51587 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC4.57□□□□□ -1.68
BRCA2P51587 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRCA2P51587 MAPK10-303ENST00000641324 3959 ntBASIC4.56□□□□□ -1.68
BRCA2P51587 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.56□□□□□ -1.68
BRCA2P51587 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.56□□□□□ -1.68
BRCA2P51587 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.56□□□□□ -1.68
BRCA2P51587 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
BRCA2P51587 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRCA2P51587 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRCA2P51587 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
BRCA2P51587 SNORD3H-201ENST00000384486 214 ntBASIC4.56□□□□□ -1.68
BRCA2P51587 AC069304.1-201ENST00000491593 704 ntBASIC4.56□□□□□ -1.68
BRCA2P51587 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRCA2P51587 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.56□□□□□ -1.68
BRCA2P51587 SCARNA15.3-201ENST00000626315 122 ntBASIC4.56□□□□□ -1.68
BRCA2P51587 SCARNA4.1-201ENST00000628597 123 ntBASIC4.56□□□□□ -1.68
BRCA2P51587 AL596275.2-208ENST00000641192 594 ntBASIC4.56□□□□□ -1.68
BRCA2P51587 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRCA2P51587 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
BRCA2P51587 ZFRP1-201ENST00000457579 2970 ntBASIC4.56□□□□□ -1.68
BRCA2P51587 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRCA2P51587 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
BRCA2P51587 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRCA2P51587 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRCA2P51587 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.56□□□□□ -1.68
BRCA2P51587 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
BRCA2P51587 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BRCA2P51587 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BRCA2P51587 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.56□□□□□ -1.68
BRCA2P51587 AC021660.1-201ENST00000465006 554 ntBASIC4.56□□□□□ -1.68
BRCA2P51587 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.56□□□□□ -1.68
BRCA2P51587 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.56□□□□□ -1.68
BRCA2P51587 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
BRCA2P51587 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRCA2P51587 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRCA2P51587 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
BRCA2P51587 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC4.55□□□□□ -1.68
BRCA2P51587 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BRCA2P51587 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BRCA2P51587 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
BRCA2P51587 RPS3AP6-201ENST00000484430 795 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 AC020893.1-201ENST00000502452 580 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BRCA2P51587 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BRCA2P51587 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.55□□□□□ -1.68
BRCA2P51587 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BRCA2P51587 AL160290.3-201ENST00000604869 165 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC4.55□□□□□ -1.68
BRCA2P51587 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRCA2P51587 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRCA2P51587 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BRCA2P51587 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
BRCA2P51587 PDSS1P2-201ENST00000449397 678 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 AC092691.2-201ENST00000461787 803 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 AC010374.1-201ENST00000503762 1237 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.55□□□□□ -1.68
BRCA2P51587 RNU1-30P-201ENST00000606575 163 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 U3.45-201ENST00000607547 219 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BRCA2P51587 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
BRCA2P51587 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.55□□□□□ -1.68
BRCA2P51587 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.55□□□□□ -1.68
BRCA2P51587 U1.1-201ENST00000384101 164 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 U3.26-201ENST00000391236 204 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 MIR1251-201ENST00000408552 70 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 CBX1P3-201ENST00000413296 527 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 AC025518.1-201ENST00000479856 347 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 RN7SL812P-201ENST00000493791 279 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 KRT19P6-201ENST00000510983 209 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
BRCA2P51587 AC005972.3-201ENST00000606304 481 ntBASIC4.55□□□□□ -1.68
BRCA2P51587 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BRCA2P51587 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCA2P51587 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCA2P51587 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCA2P51587 AL158156.1-201ENST00000422509 473 ntBASIC4.54□□□□□ -1.68
BRCA2P51587 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC4.54□□□□□ -1.68
BRCA2P51587 CYCSP53-201ENST00000455540 265 ntBASIC4.54□□□□□ -1.68
BRCA2P51587 MIR3922-201ENST00000585192 84 ntBASIC4.54□□□□□ -1.68
BRCA2P51587 AC114878.2-201ENST00000604863 1251 ntBASIC4.54□□□□□ -1.68
BRCA2P51587 AP000542.2-201ENST00000623199 6179 ntBASIC4.54□□□□□ -1.68
BRCA2P51587 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
BRCA2P51587 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
BRCA2P51587 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCA2P51587 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
BRCA2P51587 RNU1-33P-201ENST00000364249 162 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms