Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.1□□□□□ -1.59
CTNNA1P35221 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.1□□□□□ -1.59
CTNNA1P35221 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CTNNA1P35221 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTNNA1P35221 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTNNA1P35221 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTNNA1P35221 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTNNA1P35221 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTNNA1P35221 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTNNA1P35221 AC108751.5-201ENST00000492880 1336 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTNNA1P35221 RNU1-83P-201ENST00000363426 164 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CTNNA1P35221 AL590290.1-201ENST00000405336 380 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 AF186996.5-201ENST00000418098 904 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 FO393419.3-201ENST00000428741 282 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 AL035458.1-201ENST00000433096 585 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.09□□□□□ -1.59
CTNNA1P35221 Z80107.2-201ENST00000445127 392 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.09□□□□□ -1.59
CTNNA1P35221 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.09□□□□□ -1.59
CTNNA1P35221 RPL7P31-201ENST00000450192 724 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 TPRKBP1-201ENST00000456243 481 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTNNA1P35221 RN7SL244P-201ENST00000493405 297 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 RN7SL558P-201ENST00000497468 299 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 AC104109.1-201ENST00000498563 436 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 SNORA31.13-201ENST00000516624 135 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 RNU6-709P-201ENST00000517257 104 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.09□□□□□ -1.59
CTNNA1P35221 AC004923.2-201ENST00000529649 369 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 SNORA74C-1-201ENST00000580726 201 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 MIR4691-201ENST00000583764 85 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 RN7SL52P-201ENST00000584271 284 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.09□□□□□ -1.59
CTNNA1P35221 AC093765.1-201ENST00000603758 881 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 AC010424.2-201ENST00000607594 443 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 AC234782.5-201ENST00000617723 324 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 AL022401.1-201ENST00000619498 108 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.09□□□□□ -1.59
CTNNA1P35221 AL353662.3-201ENST00000625131 237 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.09□□□□□ -1.59
CTNNA1P35221 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.09□□□□□ -1.59
CTNNA1P35221 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTNNA1P35221 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTNNA1P35221 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTNNA1P35221 Z73965.1-201ENST00000623412 2297 ntBASIC5.09□□□□□ -1.59
CTNNA1P35221 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CTNNA1P35221 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CTNNA1P35221 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CTNNA1P35221 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.09□□□□□ -1.6
CTNNA1P35221 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CTNNA1P35221 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CTNNA1P35221 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CTNNA1P35221 AC000123.3-201ENST00000624029 4975 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNA1P35221 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CTNNA1P35221 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.08□□□□□ -1.6
CTNNA1P35221 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNA1P35221 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNA1P35221 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CTNNA1P35221 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNA1P35221 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNA1P35221 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNA1P35221 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CTNNA1P35221 RNA5SP428-201ENST00000365129 132 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNA1P35221 SNORD96B-201ENST00000386148 79 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNA1P35221 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.08□□□□□ -1.6
CTNNA1P35221 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNA1P35221 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNA1P35221 MTCO3P4-201ENST00000419236 787 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 RPS27P18-201ENST00000431701 247 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 MTND4LP7-201ENST00000431728 294 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNA1P35221 AC004938.1-201ENST00000438468 308 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 AL391987.1-201ENST00000441025 200 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.08□□□□□ -1.6
CTNNA1P35221 RN7SL172P-201ENST00000460535 303 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.08□□□□□ -1.6
CTNNA1P35221 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNA1P35221 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.08□□□□□ -1.6
CTNNA1P35221 ATP5LP3-201ENST00000514223 304 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNA1P35221 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNA1P35221 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNA1P35221 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.08□□□□□ -1.6
CTNNA1P35221 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.08□□□□□ -1.6
CTNNA1P35221 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.08□□□□□ -1.6
CTNNA1P35221 AC011477.5-201ENST00000586571 259 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 AP003117.1-201ENST00000602771 554 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 AC015804.1-201ENST00000622935 435 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 PABPC1P6-201ENST00000445594 1829 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNA1P35221 USP9YP4-201ENST00000424401 1745 ntBASIC5.08□□□□□ -1.6
CTNNA1P35221 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms