Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC023575.1-201ENST00000580510 358 ntBASIC5.39□□□□□ -1.55
HOXC6P09630 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC6P09630 AC008507.2-201ENST00000588402 1176 ntBASIC5.39□□□□□ -1.55
HOXC6P09630 FAM60CP-201ENST00000591086 664 ntBASIC5.39□□□□□ -1.55
HOXC6P09630 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC6P09630 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC6P09630 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC6P09630 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC6P09630 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC6P09630 AC099654.8-201ENST00000637757 681 ntBASIC5.39□□□□□ -1.55
HOXC6P09630 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC6P09630 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC6P09630 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC6P09630 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC6P09630 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
HOXC6P09630 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC6P09630 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HOXC6P09630 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC6P09630 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC6P09630 MTCO1P4-201ENST00000520516 1409 ntBASIC5.39□□□□□ -1.55
HOXC6P09630 MFSD8-220ENST00000641243 1422 ntBASIC5.39□□□□□ -1.55
HOXC6P09630 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC6P09630 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC6P09630 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC6P09630 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC6P09630 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
HOXC6P09630 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
HOXC6P09630 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HOXC6P09630 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC6P09630 THAP12P8-201ENST00000447914 2115 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC6P09630 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC6P09630 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC6P09630 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC6P09630 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HOXC6P09630 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HOXC6P09630 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC6P09630 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC6P09630 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC6P09630 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC6P09630 AL451139.1-201ENST00000434718 346 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 AC073052.1-201ENST00000440417 714 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 RNU7-157P-201ENST00000459600 66 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 AC109327.1-201ENST00000471666 403 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC6P09630 MTND4LP2-201ENST00000502312 285 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC6P09630 AC093824.1-201ENST00000508796 343 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC6P09630 RNU6-1334P-201ENST00000516032 105 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 VTA1P2-201ENST00000520205 911 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC6P09630 AL109766.1-201ENST00000555080 552 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC6P09630 AC074276.2-201ENST00000619891 348 ntBASIC5.38□□□□□ -1.55
HOXC6P09630 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC6P09630 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HOXC6P09630 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC6P09630 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC6P09630 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC6P09630 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC6P09630 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC6P09630 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC6P09630 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC6P09630 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC6P09630 MFSD8-242ENST00000641690 4199 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC6P09630 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC6P09630 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC6P09630 ZNF137P-201ENST00000456718 1920 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HOXC6P09630 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC6P09630 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC6P09630 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC6P09630 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC6P09630 SDHCP2-201ENST00000398565 501 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC6P09630 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC6P09630 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC6P09630 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC6P09630 NPM1P33-201ENST00000438918 872 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 H2AFZP5-201ENST00000446960 382 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 AC108463.1-201ENST00000450258 347 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC6P09630 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC6P09630 AC108729.2-201ENST00000476543 840 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 OR9N1P-201ENST00000491296 333 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 RPL36AP41-201ENST00000493820 306 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 AC098862.1-201ENST00000504991 413 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 CIR1P1-201ENST00000524055 1133 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.37□□□□□ -1.55
HOXC6P09630 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
HOXC6P09630 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC6P09630 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC6P09630 MTND1P24-201ENST00000552175 861 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 AC027176.2-201ENST00000559166 746 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 AC093510.2-201ENST00000562820 896 ntBASIC5.37□□□□□ -1.55
HOXC6P09630 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HOXC6P09630 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms