Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
RETP07949 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RETP07949 AC017104.4-201ENST00000636283 1592 ntBASIC4.79□□□□□ -1.64
RETP07949 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RETP07949 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RETP07949 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RETP07949 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.79□□□□□ -1.64
RETP07949 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.79□□□□□ -1.64
RETP07949 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.79□□□□□ -1.64
RETP07949 ATP5F1P2-201ENST00000398143 760 ntBASIC4.79□□□□□ -1.64
RETP07949 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.79□□□□□ -1.64
RETP07949 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.79□□□□□ -1.64
RETP07949 AL590609.2-201ENST00000421430 368 ntBASIC4.79□□□□□ -1.64
RETP07949 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.79□□□□□ -1.64
RETP07949 AC006946.1-201ENST00000429106 328 ntBASIC4.79□□□□□ -1.64
RETP07949 CBX1P1-201ENST00000440184 427 ntBASIC4.79□□□□□ -1.64
RETP07949 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RETP07949 EEF1A1P1-201ENST00000447052 739 ntBASIC4.79□□□□□ -1.64
RETP07949 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.79□□□□□ -1.64
RETP07949 AC093166.2-201ENST00000455969 1017 ntBASIC4.79□□□□□ -1.64
RETP07949 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.79□□□□□ -1.64
RETP07949 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.79□□□□□ -1.64
RETP07949 AC020890.1-201ENST00000491837 504 ntBASIC4.79□□□□□ -1.64
RETP07949 AC020593.1-201ENST00000507399 299 ntBASIC4.79□□□□□ -1.64
RETP07949 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.79□□□□□ -1.64
RETP07949 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.79□□□□□ -1.64
RETP07949 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.79□□□□□ -1.64
RETP07949 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.79□□□□□ -1.64
RETP07949 AL353600.1-201ENST00000608148 251 ntBASIC4.79□□□□□ -1.64
RETP07949 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.79□□□□□ -1.64
RETP07949 BMS1P21-201ENST00000634565 365 ntBASIC4.79□□□□□ -1.64
RETP07949 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RETP07949 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
RETP07949 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.78□□□□□ -1.64
RETP07949 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RETP07949 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
RETP07949 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RETP07949 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RETP07949 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RETP07949 CR382285.2-201ENST00000624662 1495 ntBASIC4.78□□□□□ -1.64
RETP07949 RPL32P23-201ENST00000397237 405 ntBASIC4.78□□□□□ -1.64
RETP07949 EIF4A1P3-201ENST00000411521 244 ntBASIC4.78□□□□□ -1.64
RETP07949 RPL36AP36-201ENST00000418616 301 ntBASIC4.78□□□□□ -1.64
RETP07949 EIF4A1P1-201ENST00000420241 934 ntBASIC4.78□□□□□ -1.64
RETP07949 RPS12P10-201ENST00000427031 377 ntBASIC4.78□□□□□ -1.64
RETP07949 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.78□□□□□ -1.64
RETP07949 CYCSP11-201ENST00000436426 315 ntBASIC4.78□□□□□ -1.64
RETP07949 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RETP07949 AL357520.1-201ENST00000441557 453 ntBASIC4.78□□□□□ -1.64
RETP07949 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.78□□□□□ -1.64
RETP07949 HMGB1P4-201ENST00000455362 567 ntBASIC4.78□□□□□ -1.64
RETP07949 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RETP07949 RPL23AP24-201ENST00000458203 385 ntBASIC4.78□□□□□ -1.64
RETP07949 RPL5P30-201ENST00000465511 891 ntBASIC4.78□□□□□ -1.64
RETP07949 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.78□□□□□ -1.64
RETP07949 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.78□□□□□ -1.64
RETP07949 RNA5SP392-201ENST00000516905 112 ntBASIC4.78□□□□□ -1.64
RETP07949 CD24P2-201ENST00000565486 219 ntBASIC4.78□□□□□ -1.64
RETP07949 MIR3138-201ENST00000585238 82 ntBASIC4.78□□□□□ -1.64
RETP07949 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.78□□□□□ -1.64
RETP07949 AC100847.1-201ENST00000611316 481 ntBASIC4.78□□□□□ -1.64
RETP07949 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.78□□□□□ -1.64
RETP07949 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RETP07949 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RETP07949 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RETP07949 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RETP07949 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.78□□□□□ -1.64
RETP07949 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.77□□□□□ -1.65
RETP07949 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RETP07949 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.77□□□□□ -1.65
RETP07949 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RETP07949 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RETP07949 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RETP07949 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RETP07949 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RETP07949 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RETP07949 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.77□□□□□ -1.65
RETP07949 ST13P16-201ENST00000401760 781 ntBASIC4.77□□□□□ -1.65
RETP07949 AMZ2P2-201ENST00000406819 1057 ntBASIC4.77□□□□□ -1.65
RETP07949 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.77□□□□□ -1.65
RETP07949 TBCAP2-201ENST00000416175 326 ntBASIC4.77□□□□□ -1.65
RETP07949 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.77□□□□□ -1.65
RETP07949 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.77□□□□□ -1.65
RETP07949 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RETP07949 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.77□□□□□ -1.65
RETP07949 AC114755.5-201ENST00000447760 831 ntBASIC4.77□□□□□ -1.65
RETP07949 AL445433.1-201ENST00000457507 257 ntBASIC4.77□□□□□ -1.65
RETP07949 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.77□□□□□ -1.65
RETP07949 AC112206.1-201ENST00000468416 477 ntBASIC4.77□□□□□ -1.65
RETP07949 RN7SL303P-201ENST00000469773 251 ntBASIC4.77□□□□□ -1.65
RETP07949 AC091167.1-201ENST00000492017 396 ntBASIC4.77□□□□□ -1.65
RETP07949 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.77□□□□□ -1.65
RETP07949 SAP18P1-201ENST00000512058 390 ntBASIC4.77□□□□□ -1.65
RETP07949 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.77□□□□□ -1.65
RETP07949 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
RETP07949 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.77□□□□□ -1.65
RETP07949 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RETP07949 AC011477.5-201ENST00000586571 259 ntBASIC4.77□□□□□ -1.65
RETP07949 AC010424.2-201ENST00000607594 443 ntBASIC4.77□□□□□ -1.65
RETP07949 AL049794.2-201ENST00000616301 365 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms