Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC092490.3-201ENST00000545370 572 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.44□□□□□ -1.7
MT-ND1P03886 AC090079.2-201ENST00000575289 768 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 MIR3176-201ENST00000582210 90 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 AC233280.2-201ENST00000603917 1070 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.44□□□□□ -1.7
MT-ND1P03886 AL133445.2-201ENST00000611191 527 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 AC074276.2-201ENST00000619891 348 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 AC020978.9-201ENST00000624380 1141 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 AL353662.3-201ENST00000625131 237 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MT-ND1P03886 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
MT-ND1P03886 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.44□□□□□ -1.7
MT-ND1P03886 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
MT-ND1P03886 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.44□□□□□ -1.7
MT-ND1P03886 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
MT-ND1P03886 HSPA8P18-201ENST00000439846 1928 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 EOGT-210ENST00000615922 1931 ntBASIC4.44□□□□□ -1.7
MT-ND1P03886 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MT-ND1P03886 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.44□□□□□ -1.7
MT-ND1P03886 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.44□□□□□ -1.7
MT-ND1P03886 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MT-ND1P03886 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.43□□□□□ -1.7
MT-ND1P03886 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MT-ND1P03886 AC000123.3-201ENST00000624029 4975 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 LINC01109-201ENST00000603837 3081 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.43□□□□□ -1.7
MT-ND1P03886 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.43□□□□□ -1.7
MT-ND1P03886 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.43□□□□□ -1.7
MT-ND1P03886 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.43□□□□□ -1.7
MT-ND1P03886 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MT-ND1P03886 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MT-ND1P03886 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
MT-ND1P03886 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
MT-ND1P03886 AC011155.1-201ENST00000316512 456 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 RNU4-39P-201ENST00000362455 127 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 Y_RNA.110-201ENST00000363220 99 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 RNA5SP455-201ENST00000365190 119 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 RNA5SP372-201ENST00000390836 115 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AL021331.1-201ENST00000402817 582 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 RN7SKP167-201ENST00000411047 285 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.43□□□□□ -1.7
MT-ND1P03886 AC005033.1-201ENST00000428904 813 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 TMX2P1-201ENST00000436507 708 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AP000949.1-201ENST00000438328 629 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.43□□□□□ -1.7
MT-ND1P03886 AC104651.2-201ENST00000447549 528 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
MT-ND1P03886 APOOP2-201ENST00000461561 539 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.43□□□□□ -1.7
MT-ND1P03886 RPS18P6-201ENST00000476880 458 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AC090114.3-201ENST00000479267 829 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 RN7SL319P-201ENST00000480656 221 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 RPS27AP16-201ENST00000492222 470 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AC005912.1-201ENST00000495392 255 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 HIGD1AP14-201ENST00000507617 282 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.43□□□□□ -1.7
MT-ND1P03886 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.43□□□□□ -1.7
MT-ND1P03886 AC134698.5-201ENST00000519444 336 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.43□□□□□ -1.7
MT-ND1P03886 MTND1P36-201ENST00000522384 936 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MT-ND1P03886 CYCSP28-201ENST00000534284 321 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.43□□□□□ -1.7
MT-ND1P03886 AC008083.2-201ENST00000546707 476 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.43□□□□□ -1.7
MT-ND1P03886 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.43□□□□□ -1.7
MT-ND1P03886 AL049844.2-201ENST00000604280 628 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AC090948.2-201ENST00000607363 564 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AC010424.2-201ENST00000607594 443 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AL355802.4-201ENST00000607635 548 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 AC006213.4-201ENST00000616184 634 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 uc_338.9-201ENST00000617424 182 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
MT-ND1P03886 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MT-ND1P03886 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
MT-ND1P03886 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
MT-ND1P03886 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MT-ND1P03886 Z95327.2-201ENST00000414579 1873 ntBASIC4.43□□□□□ -1.7
MT-ND1P03886 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MT-ND1P03886 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.43□□□□□ -1.7
MT-ND1P03886 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.42□□□□□ -1.7
MT-ND1P03886 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
MT-ND1P03886 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.42□□□□□ -1.7
MT-ND1P03886 AC120338.1-201ENST00000625074 1541 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.42□□□□□ -1.7
MT-ND1P03886 TLK1P1-201ENST00000456760 2440 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
MT-ND1P03886 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.42□□□□□ -1.7
MT-ND1P03886 RNA5SP428-201ENST00000365129 132 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.42□□□□□ -1.7
MT-ND1P03886 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MT-ND1P03886 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
MT-ND1P03886 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MT-ND1P03886 CCNB2P1-201ENST00000399411 1150 ntBASIC4.42□□□□□ -1.7
MT-ND1P03886 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MT-ND1P03886 RNA5SP146-201ENST00000410743 123 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms