Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC009237.10-201ENST00000414112 510 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 CACYBPP1-201ENST00000438592 684 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN9O95484 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN9O95484 SCARNA10-201ENST00000459255 330 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN9O95484 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN9O95484 TCP11X3P-202ENST00000514289 1254 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 RNA5SP464-201ENST00000516251 108 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.44□□□□□ -1.7
CLDN9O95484 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN9O95484 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN9O95484 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN9O95484 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN9O95484 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN9O95484 ADAD1P2-201ENST00000588476 646 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN9O95484 RPL7P50-201ENST00000600588 727 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 AC023762.1-201ENST00000603280 584 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN9O95484 AC100827.5-201ENST00000615883 426 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN9O95484 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN9O95484 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
CLDN9O95484 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN9O95484 A2MP1-204ENST00000566278 4130 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 ZNF137P-201ENST00000456718 1920 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN9O95484 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CLDN9O95484 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN9O95484 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN9O95484 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN9O95484 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
CLDN9O95484 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN9O95484 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN9O95484 AC120338.1-201ENST00000625074 1541 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN9O95484 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN9O95484 CASC19-204ENST00000641001 2055 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLDN9O95484 SNORA71.2-201ENST00000364941 134 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 MIR550A3-201ENST00000390735 95 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AL607077.1-201ENST00000401718 499 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 ST13P16-201ENST00000401760 781 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 FCF1P5-201ENST00000406490 482 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN9O95484 AL590806.1-201ENST00000415818 853 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN9O95484 ATG4AP1-201ENST00000416893 538 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN9O95484 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN9O95484 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN9O95484 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
CLDN9O95484 RPL23AP25-201ENST00000430973 463 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 VN1R54P-201ENST00000435210 1049 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AC073648.4-201ENST00000442655 781 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN9O95484 AL645937.3-201ENST00000453647 936 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 HIGD1AP8-201ENST00000453927 274 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 FTH1P2-201ENST00000466086 412 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AC096741.1-201ENST00000472250 846 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 RN7SL41P-201ENST00000476144 297 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CLDN9O95484 RN7SL817P-201ENST00000480777 288 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 DEFB109F-201ENST00000491870 277 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 HAUS1P1-201ENST00000505275 832 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN9O95484 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN9O95484 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN9O95484 MIR4737-201ENST00000583979 81 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN9O95484 AC098935.2-201ENST00000604222 466 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 HMGB1P51-201ENST00000605166 638 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.43□□□□□ -1.7
CLDN9O95484 AL445528.2-201ENST00000620582 470 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AC091905.2-201ENST00000623143 306 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AP002967.1-201ENST00000624203 539 ntBASIC4.43□□□□□ -1.7
CLDN9O95484 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN9O95484 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN9O95484 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN9O95484 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN9O95484 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN9O95484 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN9O95484 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLDN9O95484 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN9O95484 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CLDN9O95484 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
CLDN9O95484 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN9O95484 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN9O95484 DDX18P4-201ENST00000511690 1966 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN9O95484 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN9O95484 RNU6-564P-201ENST00000410983 104 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN9O95484 RPS26P13-201ENST00000419030 330 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 RAD1P2-201ENST00000446414 663 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN9O95484 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN9O95484 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms