Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC004825.1-201ENST00000555068 586 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AL359219.2-201ENST00000555184 348 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-2O95096 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-2O95096 NDUFB4P11-201ENST00000560510 395 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.73□□□□□ -1.65
NKX2-2O95096 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-2O95096 MIR4489-201ENST00000578869 62 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AC010503.3-201ENST00000594355 540 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-2O95096 PSMA6P4-201ENST00000603247 718 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 RPAP2P1-201ENST00000603626 1168 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-2O95096 MIR6862-1-201ENST00000613016 70 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 MIR6862-2-201ENST00000614755 70 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 AC016717.3-201ENST00000624730 554 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-2O95096 BX649567.1-201ENST00000642071 1134 ntBASIC4.73□□□□□ -1.65
NKX2-2O95096 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-2O95096 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-2O95096 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
NKX2-2O95096 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-2O95096 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-2O95096 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-2O95096 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-2O95096 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-2O95096 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-2O95096 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
NKX2-2O95096 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-2O95096 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-2O95096 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-2O95096 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-2O95096 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-2O95096 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 MIR223-201ENST00000385204 110 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 MIR92A2-201ENST00000385299 75 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 MCTS2P-201ENST00000394552 546 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 SNORA11C-201ENST00000408532 129 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 RN7SKP114-201ENST00000410327 279 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 RNU2-6P-201ENST00000411404 190 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-2O95096 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AC092634.2-201ENST00000428146 1010 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 DYNLL1P7-201ENST00000429273 258 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 PPIAP13-201ENST00000434706 478 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AC092013.1-201ENST00000438795 332 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 RPS7P5-201ENST00000441482 581 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 TPTE2P6-202ENST00000445572 1007 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 KNOP1P3-201ENST00000446933 426 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 EXOSC3P1-201ENST00000448649 500 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX2-2O95096 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX2-2O95096 RPS26P39-201ENST00000469206 341 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AC097484.1-201ENST00000471148 389 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.72□□□□□ -1.65
NKX2-2O95096 AC023050.1-201ENST00000498198 304 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 SNRPCP2-201ENST00000504370 475 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 HPRT1P2-201ENST00000505250 544 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AC008837.1-201ENST00000511513 412 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX2-2O95096 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX2-2O95096 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.72□□□□□ -1.65
NKX2-2O95096 OR8A2P-201ENST00000528631 952 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 NDUFS5P6-201ENST00000529136 295 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-2O95096 AC090751.1-201ENST00000566966 267 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 MTND4LP24-201ENST00000572277 291 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AC123786.2-201ENST00000603459 275 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 RPP40P2-201ENST00000603596 712 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 SUMO2P15-201ENST00000604285 278 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 BX005214.3-202ENST00000619809 325 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AP000648.2-201ENST00000624182 404 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AC092608.3-201ENST00000625017 386 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 ATE1-AS1-202ENST00000636460 506 ntBASIC4.72□□□□□ -1.65
NKX2-2O95096 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX2-2O95096 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX2-2O95096 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX2-2O95096 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-2O95096 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.72□□□□□ -1.65
NKX2-2O95096 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-2O95096 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-2O95096 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-2O95096 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-2O95096 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-2O95096 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms