Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF40O75150 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 AL845552.1-201ENST00000556820 323 ntBASIC7.77□□□□□ -1.17
RNF40O75150 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.77□□□□□ -1.17
RNF40O75150 FAM30C-201ENST00000561158 410 ntBASIC7.77□□□□□ -1.17
RNF40O75150 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 AC027796.1-201ENST00000575593 512 ntBASIC7.77□□□□□ -1.17
RNF40O75150 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.77□□□□□ -1.17
RNF40O75150 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.77□□□□□ -1.17
RNF40O75150 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF40O75150 AC107871.2-201ENST00000612894 502 ntBASIC7.77□□□□□ -1.17
RNF40O75150 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.77□□□□□ -1.17
RNF40O75150 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.77□□□□□ -1.17
RNF40O75150 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 MTND5P10-201ENST00000603719 1809 ntBASIC7.77□□□□□ -1.17
RNF40O75150 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF40O75150 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF40O75150 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF40O75150 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
RNF40O75150 OR11H5P-202ENST00000641612 1325 ntBASIC7.77□□□□□ -1.17
RNF40O75150 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 AC104581.5-201ENST00000624171 7141 ntBASIC7.76□□□□□ -1.17
RNF40O75150 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF40O75150 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 CYP2G2P-201ENST00000594920 1485 ntBASIC7.76□□□□□ -1.17
RNF40O75150 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
RNF40O75150 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
RNF40O75150 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
RNF40O75150 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.76□□□□□ -1.17
RNF40O75150 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
RNF40O75150 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
RNF40O75150 Y_RNA.46-201ENST00000362695 102 ntBASIC7.76□□□□□ -1.17
RNF40O75150 RNU1-24P-201ENST00000364285 165 ntBASIC7.76□□□□□ -1.17
RNF40O75150 Y_RNA.556-201ENST00000384677 113 ntBASIC7.76□□□□□ -1.17
RNF40O75150 RPL24P7-201ENST00000399435 453 ntBASIC7.76□□□□□ -1.17
RNF40O75150 MIR320C1-201ENST00000408566 88 ntBASIC7.76□□□□□ -1.17
RNF40O75150 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.76□□□□□ -1.17
RNF40O75150 VDAC1P10-201ENST00000416715 891 ntBASIC7.76□□□□□ -1.17
RNF40O75150 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF40O75150 AF274573.1-201ENST00000430535 494 ntBASIC7.76□□□□□ -1.17
RNF40O75150 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC7.76□□□□□ -1.17
RNF40O75150 NRBF2P3-201ENST00000432731 865 ntBASIC7.76□□□□□ -1.17
RNF40O75150 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF40O75150 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.76□□□□□ -1.17
RNF40O75150 AC092601.1-201ENST00000444526 383 ntBASIC7.76□□□□□ -1.17
RNF40O75150 GTF2F2P2-201ENST00000445825 721 ntBASIC7.76□□□□□ -1.17
RNF40O75150 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 MRPS31P2-201ENST00000451581 518 ntBASIC7.76□□□□□ -1.17
RNF40O75150 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF40O75150 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF40O75150 TRBV1-201ENST00000476502 284 ntBASIC7.76□□□□□ -1.17
RNF40O75150 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF40O75150 AC023818.1-201ENST00000498379 384 ntBASIC7.76□□□□□ -1.17
RNF40O75150 TMEM248P1-201ENST00000510579 951 ntBASIC7.76□□□□□ -1.17
RNF40O75150 RNU6-201P-201ENST00000517100 61 ntBASIC7.76□□□□□ -1.17
RNF40O75150 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.76□□□□□ -1.17
RNF40O75150 MRPS16P1-201ENST00000523462 412 ntBASIC7.76□□□□□ -1.17
RNF40O75150 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.76□□□□□ -1.17
RNF40O75150 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.76□□□□□ -1.17
RNF40O75150 AC099489.2-201ENST00000574976 260 ntBASIC7.76□□□□□ -1.17
RNF40O75150 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.76□□□□□ -1.17
RNF40O75150 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.76□□□□□ -1.17
RNF40O75150 AC016629.2-201ENST00000597341 199 ntBASIC7.76□□□□□ -1.17
RNF40O75150 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF40O75150 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF40O75150 AC016727.2-201ENST00000603988 621 ntBASIC7.76□□□□□ -1.17
RNF40O75150 AL592436.1-201ENST00000605135 558 ntBASIC7.76□□□□□ -1.17
RNF40O75150 AL136139.1-201ENST00000605568 222 ntBASIC7.76□□□□□ -1.17
RNF40O75150 AL136985.2-201ENST00000607372 535 ntBASIC7.76□□□□□ -1.17
RNF40O75150 AC078938.1-201ENST00000620993 318 ntBASIC7.76□□□□□ -1.17
RNF40O75150 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.76□□□□□ -1.17
RNF40O75150 MIR193BHG-214ENST00000641765 509 ntBASIC7.76□□□□□ -1.17
RNF40O75150 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.76□□□□□ -1.17
RNF40O75150 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF40O75150 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
RNF40O75150 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF40O75150 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
RNF40O75150 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF40O75150 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF40O75150 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
RNF40O75150 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms