Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.08□□□□□ -1.6
SMAD6O43541 AC104837.2-201ENST00000427236 424 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SMAD6O43541 RPL7P11-201ENST00000437586 658 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 TXNP5-201ENST00000441043 315 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 AL513321.1-201ENST00000441175 761 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.08□□□□□ -1.6
SMAD6O43541 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.08□□□□□ -1.6
SMAD6O43541 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.08□□□□□ -1.6
SMAD6O43541 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.08□□□□□ -1.6
SMAD6O43541 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.08□□□□□ -1.6
SMAD6O43541 RPL7P16-201ENST00000479738 738 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 RN7SL441P-201ENST00000492388 296 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.08□□□□□ -1.6
SMAD6O43541 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.08□□□□□ -1.6
SMAD6O43541 MTND1P22-201ENST00000510572 951 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.08□□□□□ -1.6
SMAD6O43541 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.08□□□□□ -1.6
SMAD6O43541 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.08□□□□□ -1.6
SMAD6O43541 AP003066.2-201ENST00000529375 555 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 AC021006.3-201ENST00000530771 192 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 OR5D15P-201ENST00000531671 942 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SMAD6O43541 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.08□□□□□ -1.6
SMAD6O43541 OR4U1P-201ENST00000554958 912 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 GLRXP2-201ENST00000555594 321 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.08□□□□□ -1.6
SMAD6O43541 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.08□□□□□ -1.6
SMAD6O43541 MIR3934-201ENST00000579806 107 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.08□□□□□ -1.6
SMAD6O43541 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.08□□□□□ -1.6
SMAD6O43541 AC011487.3-201ENST00000593607 453 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 GAS5-AS1-201ENST00000602767 694 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 AC005377.1-201ENST00000605126 456 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 AL365400.2-201ENST00000605604 902 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.08□□□□□ -1.6
SMAD6O43541 AC245389.2-201ENST00000616023 576 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 AC242843.1-201ENST00000618702 573 ntBASIC5.08□□□□□ -1.6
SMAD6O43541 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMAD6O43541 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.08□□□□□ -1.6
SMAD6O43541 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
SMAD6O43541 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SMAD6O43541 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SMAD6O43541 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMAD6O43541 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMAD6O43541 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMAD6O43541 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMAD6O43541 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.07□□□□□ -1.6
SMAD6O43541 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SMAD6O43541 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
SMAD6O43541 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMAD6O43541 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.07□□□□□ -1.6
SMAD6O43541 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMAD6O43541 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SMAD6O43541 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.07□□□□□ -1.6
SMAD6O43541 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMAD6O43541 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMAD6O43541 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SMAD6O43541 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMAD6O43541 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMAD6O43541 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMAD6O43541 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMAD6O43541 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SMAD6O43541 RNU6-178P-201ENST00000384631 104 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.07□□□□□ -1.6
SMAD6O43541 COX6B1P1-201ENST00000415962 213 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 AL590609.2-201ENST00000421430 368 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SMAD6O43541 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.07□□□□□ -1.6
SMAD6O43541 PRPF38AP2-201ENST00000438179 851 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 AL450023.3-201ENST00000440592 271 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 RNFT1P2-201ENST00000443064 757 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 AC112498.1-201ENST00000444401 332 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 AC004980.3-201ENST00000447046 365 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.07□□□□□ -1.6
SMAD6O43541 RPL10P17-201ENST00000453852 316 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.07□□□□□ -1.6
SMAD6O43541 NPM1P29-201ENST00000483112 803 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 IGLV2-34-201ENST00000490007 283 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.07□□□□□ -1.6
SMAD6O43541 AC069306.1-201ENST00000507006 843 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.07□□□□□ -1.6
SMAD6O43541 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.07□□□□□ -1.6
SMAD6O43541 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.07□□□□□ -1.6
SMAD6O43541 RNU5A-7P-201ENST00000515979 116 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 RNA5SP228-201ENST00000516232 133 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.07□□□□□ -1.6
SMAD6O43541 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.07□□□□□ -1.6
SMAD6O43541 AC100784.1-201ENST00000522790 310 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 AC118942.1-201ENST00000529674 1035 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 BRD9P1-201ENST00000529855 560 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.07□□□□□ -1.6
SMAD6O43541 NDUFB4P11-201ENST00000560510 395 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.07□□□□□ -1.6
SMAD6O43541 FAM60CP-201ENST00000591086 664 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.07□□□□□ -1.6
SMAD6O43541 FAM25E-202ENST00000608562 189 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 AC092954.1-201ENST00000609121 445 ntBASIC5.07□□□□□ -1.6
SMAD6O43541 AL049539.1-201ENST00000611964 459 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms